PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.2428

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 397aa MW: 44561.3 Da PI: 8.5317

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.2428	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.4	4.7e-52	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 + pGfrFhPtdeelv +yLk+k+ +k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t + evm.model.AsparagusV1_08.2428 15 MLPGFRFHPTDEELVGFYLKRKILKKPLSI-ELIRQLDIYKYDPWDLPKLATSGEKEWYFYCPRDRKYRNSARPNRVTGA 93 579*************************.89***********8888999********************* PP NAM 81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 g+Wkatg+d++++s+ +++ +glkk+Lvfykgra kg ktdW+mhe+rl evm.model.AsparagusV1_08.2428 94 GFWKATGTDRPIYSSeGTKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 142 **********956667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MEERSADMEK ADEVMLPGFR FHPTDEELVG FYLKRKILKK PLSIELIRQL DIYKYDPWDL 60 PKLATSGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG TKCIGLKKSL 120 VFYKGRAAKG IKTDWMMHEF RLPSITDTSL PKRPLDKNIP ANESWAICRI FKKTNSTAHR 180 ALSQSWVSPL PETIESDLFS VAHTLNANQF GSDNNIPCTM EAGSSIQFSS NNGFQQQTSG 240 INYPPLGIPT YNKLNNPMNF RSYTVPASNS DISTSFKFSA SDMPLSSMLI NLSPSILGEF 300 GKCSPSIDFG QPQHCNGFTN DFHAEVRSHL GNGEDEKKSS NTIIVNKNHW GAARTVSFPF 360 SLPPNISDEW KQNLPLDSPP CPSEMSTSLS TNKCYT*

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MEERSADMEK ADEVMLPGFR FHPTDEELVG FYLKRKILKK PLSIELIRQL DIYKYDPWDL  60
PKLATSGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG TKCIGLKKSL  120
VFYKGRAAKG IKTDWMMHEF RLPSITDTSL PKRPLDKNIP ANESWAICRI FKKTNSTAHR  180
ALSQSWVSPL PETIESDLFS VAHTLNANQF GSDNNIPCTM EAGSSIQFSS NNGFQQQTSG  240
INYPPLGIPT YNKLNNPMNF RSYTVPASNS DISTSFKFSA SDMPLSSMLI NLSPSILGEF  300
GKCSPSIDFG QPQHCNGFTN DFHAEVRSHL GNGEDEKKSS NTIIVNKNHW GAARTVSFPF  360
SLPPNISDEW KQNLPLDSPP CPSEMSTSLS TNKCYT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-108	NAC family protein