PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.2419

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 649aa MW: 72193.8 Da PI: 4.2962

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.2419	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.3	1.5e-19	44	123	1	73
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkr 73 lppGfrFhPtd el+ ++Lk+k+++++ +++ ik++d+y++ePw+Lp+ +++eke+yfFs+r+ ++++ kr evm.model.AsparagusV1_08.2419 44 LPPGFRFHPTDRELIGFFLKRKIAASSSSVAAapssLIKDFDVYSTEPWNLPSdsfLSQSDEKEMYFFSPRHPTSTSAKR 123 79********************9994443333337**********944555566888*****9988776655 PP
2	NAM	43.3	1.1e-13	115	224	43	128
NAM 43 ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel...................... 99 +P + k+v+++eke+yfFs+r+ ++++ kr nr++ g+W + d++++ +e+ evm.model.AsparagusV1_08.2419 115 HPTSTSaKRVQSDEKEMYFFSPRHPTSTSAKRVNRTAGCGVWYGSAGDTTIMIG-TEVigyktqlwygsagdttimigte 193 566665468899999******************9888888877777888775.2222444444555555555555555 PP NAM 100 .vglkktLvfy.kgrapkgektdWvmheyrl 128 +g k+ L+f +g+++k ++ dW+mhe++l evm.model.AsparagusV1_08.2419 194 vIGYKTQLTFKtRGKEKKKTNGDWIMHEFHL 224 5*****977899999999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MAMAMQPVVD DDLLAMLLQQ LPPGFRFHPP VVDDDLLAML LQQLPPGFRF HPTDRELIGF 60 FLKRKIAASS SSVAAAPSSL IKDFDVYSTE PWNLPSDSFL SQSDEKEMYF FSPRHPTSTS 120 AKRVQSDEKE MYFFSPRHPT STSAKRVNRT AGCGVWYGSA GDTTIMIGTE VIGYKTQLWY 180 GSAGDTTIMI GTEVIGYKTQ LTFKTRGKEK KKTNGDWIMH EFHLHSSSDD TVFDDMVLCR 240 IYMKKGKKSS QTNEEVDNIP VPAGEQEAVA KGHRVMKRKS ADHREMGTYG LVYTKSSEQN 300 TSSVSKFPPL LSCQESNVQS DMSWIDVAVF YGKLNVEEEE EGRRMVKRRR VKENGSMVAD 360 YNEKGTSGLA NTESPSLSLL EDKHALVSYG DMEDFSSLTT DGPSCAVNFG DNEMSEAERT 420 LEQWLSEEPE LHQCLITVNN ERENCDEVNN VESTMSPSSS IGGLQADLHL INELCMAPPT 480 DDYPLTEFME SHMYFDVSDF RPLLSPTDDG ESSALLGSQK EADIPQTGPE QQEGLITNIP 540 QTVDSTDDGN SSSPLLESNE EPQGLGLLTS DMTSNIASVQ AEERLQGLMI DIPRPVNLTE 600 CLDIQRDSVA CRGELPYPPM LSDHELTILV TEAFPYMEEC LEVDDLFL*

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MAMAMQPVVD DDLLAMLLQQ LPPGFRFHPP VVDDDLLAML LQQLPPGFRF HPTDRELIGF  60
FLKRKIAASS SSVAAAPSSL IKDFDVYSTE PWNLPSDSFL SQSDEKEMYF FSPRHPTSTS  120
AKRVQSDEKE MYFFSPRHPT STSAKRVNRT AGCGVWYGSA GDTTIMIGTE VIGYKTQLWY  180
GSAGDTTIMI GTEVIGYKTQ LTFKTRGKEK KKTNGDWIMH EFHLHSSSDD TVFDDMVLCR  240
IYMKKGKKSS QTNEEVDNIP VPAGEQEAVA KGHRVMKRKS ADHREMGTYG LVYTKSSEQN  300
TSSVSKFPPL LSCQESNVQS DMSWIDVAVF YGKLNVEEEE EGRRMVKRRR VKENGSMVAD  360
YNEKGTSGLA NTESPSLSLL EDKHALVSYG DMEDFSSLTT DGPSCAVNFG DNEMSEAERT  420
LEQWLSEEPE LHQCLITVNN ERENCDEVNN VESTMSPSSS IGGLQADLHL INELCMAPPT  480
DDYPLTEFME SHMYFDVSDF RPLLSPTDDG ESSALLGSQK EADIPQTGPE QQEGLITNIP  540
QTVDSTDDGN SSSPLLESNE EPQGLGLLTS DMTSNIASVQ AEERLQGLMI DIPRPVNLTE  600
CLDIQRDSVA CRGELPYPPM LSDHELTILV TEAFPYMEEC LEVDDLFL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	347	351	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	4e-22	NAC family protein