PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2393 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 182aa MW: 20874.6 Da PI: 8.6012 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.9 | 1.5e-30 | 16 | 69 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt+eLH+rFveav+ LGG kAtPk+ilelm+vk L+++h+kSHLQ+YR+ evm.model.AsparagusV1_08.2393 16 PRLRWTEELHHRFVEAVRCLGGGRKATPKRILELMNVKELSISHIKSHLQMYRS 69 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 17 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ ++v+av+ lGgg t+k+I + m+ k ++ ++ks++q+y+ evm.model.AsparagusV1_08.2393 17 RLRWTEELHHRFVEAVRCLGGGrkaTPKRILELMNvKELSISHIKSHLQMYR 68 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MSERRGVRKY NRSEEPRLRW TEELHHRFVE AVRCLGGGRK ATPKRILELM NVKELSISHI 60 KSHLQMYRSM SNNPANFHLF LSAKDLKKHK NLQPSTFGNS GACTSQSYCK NPQLSMIRFH 120 SEEGKREIQE RAVCDLTLCS SNYQETSDWG SSIEFDTFEE SSGCEDKVDS RKVNLDLTIS 180 I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 7e-25 | G2-like family protein |