PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2354 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 133aa MW: 15021.7 Da PI: 10.2974 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.1 | 6.8e-21 | 27 | 76 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + r +lg+f+taeeAa+a+++a+ +++g evm.model.AsparagusV1_08.2354 27 KYRGVRQRP-WGKWAAEIRDPR----KaVRKWLGTFDTAEEAARAYDKAAVEFRG 76 8********.**********94....36************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MFTASETPSK TTTTKGNQKK RRNKKNKYRG VRQRPWGKWA AEIRDPRKAV RKWLGTFDTA 60 EEAARAYDKA AVEFRGARAK LNFPFPEQKQ QQQENEEGDA DGLWEGLQDL IELDDGWLRS 120 SSSAYGAPTA TV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 25 | QKKRRNKK |
2 | 19 | 24 | KKRRNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 2e-19 | ERF family protein |