PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2343 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HSF | ||||||||
Protein Properties | Length: 162aa MW: 18451.2 Da PI: 10.1292 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 75 | 1.3e-23 | 93 | 151 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k++e+++de +ke+isw eng++fvv+++ efa+++Lp +Fkh nf+SFvRQLn+Y evm.model.AsparagusV1_08.2343 93 FLMKTHEMVDDEGTKEVISWGENGTTFVVWKPVEFARDLLPVHFKHCNFSSFVRQLNTY 151 9*********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
ESWIQKILMS LLYLLSPTKQ RWEKVIKRIE ELRVQLQDAD PLTKVHQLKL STVLDEVAGK 60 IHGGYERGYV SSRSRSGNNN NSRVRANGGL APFLMKTHEM VDDEGTKEVI SWGENGTTFV 120 VWKPVEFARD LLPVHFKHCN FSSFVRQLNT YVRSPRLLAL G* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 8e-28 | HSF family protein |