PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.1925
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 310aa    MW: 35654.1 Da    PI: 4.9381
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.1925genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.61.3e-35361272102
                                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS
                   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 
                                    Fl+k+ye+++d+++  ++sws  +nsfvv+d++ f+ ++Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++         weF
  evm.model.AsparagusV1_08.1925  36 FLTKTYEMVDDQSTVGIVSWSGASNSFVVWDPHAFSMTILPRYFKHSNFSSFVRQLNTYGFRKVDPDK---------WEF 106
                                    9********************999*****************************************999.........*** PP

                                    EESXXXXXXXXXXXXXXXXXX CS
                   HSF_DNA-bind  82 khksFkkgkkellekikrkks 102
                                    +++ F +g+k+ll++i+r+k 
  evm.model.AsparagusV1_08.1925 107 ANERFLRGQKHLLKTIRRRKA 127
                                    ******************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDPLPAEVKV EYSDGPSAAP PPRPKEGLYE VGPPPFLTKT YEMVDDQSTV GIVSWSGASN  60
SFVVWDPHAF SMTILPRYFK HSNFSSFVRQ LNTYGFRKVD PDKWEFANER FLRGQKHLLK  120
TIRRRKAPPN PPHQLQSLGS SLEIGRYALD GEIGGLKRDK NILMNEVIKL RQEQQNTRAH  180
LQAMEERLKG TEQKQQQMMT FLAKAMQNPN LLQQFAQKEQ HRKELEEAIN KKRRRRIEFR  240
PDDVEPVLEL EGEGLKDLYQ FEGSELESLT IGREALENDG EVIEDVEEES GELNDDFWEE  300
LLNEGIGRD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231236KKRRRR
2232237KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-100HSF family protein