PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.1635 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 123aa MW: 13683.8 Da PI: 8.3236 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.9 | 0.0002 | 36 | 73 | 13 | 55 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i ++ eLre++P+ a K s + Lek+++Y+ Lq evm.model.AsparagusV1_08.1635 36 RQMIMDRVKELREIVPNgA------KCSIDALLEKTIKYMLFLQ 73 566778999********66......99999***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MQGESSYLPP FGKAEGLGCS SGARPGENPR PRPKDRQMIM DRVKELREIV PNGAKCSIDA 60 LLEKTIKYML FLQSVAKHAD TLKDIGEPKA ILLHANGSKE YHFTYLTWTR VSDCDMCMSF 120 AF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31280.1 | 3e-28 | bHLH family protein |