PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.142

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HSF

Protein Properties

Length: 483aa MW: 53372.4 Da PI: 4.8862

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.142	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	94.9	8.7e-30	44	122	16	103
TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 16 keliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 + ++sw n+nsfvv+++ efa+++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ evm.model.AsparagusV1_08.142 44 DAIVSWGPNNNSFVVWNTPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKT 115 689**********************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i r+k + evm.model.AsparagusV1_08.142 116 ITRRKPS 122 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MESSVTSGSP AAAAAGNPNG ERGGAAAAVP EQDVRYGGRS VRRDAIVSWG PNNNSFVVWN 60 TPEFARDLLP KHFKHNNFSS FVRQLNTYGF RKVDPDRWEF ANEGFLRGQK HLLKTITRRK 120 PSHVQSQPHP PQPQNSAVAA CVEVGKFGLE EEIEQLKRDK NVLMQELVRL RQQQQTTDHQ 180 LQTLGDRLHG MEQRQQQMMA FLAKAMQSPG FLAQLVQQND SNRRITAGNK KRRFPKQRSE 240 LNVESSSPDG QIIKYQPLIN EAAKAMLMQI LKLDSSPRLD PLNNSDGFLI DNFPSQLNSV 300 ENISSTTRTS RVTLKEVPTT SGIPYLPSNS GVSSSASTPS TSTSIVDMVK EPIAPVLSPM 360 QGVVTNGDSV NIVPENYSPL ESDNGYVPNI PPSVDEHVPL DLDSLTDDIG FLNDVENDMG 420 TLPGIEDPFW EQFLDCPVPG NDDSDMQENG EVVIEEQNGW SNAQNMDNLT EQMGHLTSEN 480 KK*

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MESSVTSGSP AAAAAGNPNG ERGGAAAAVP EQDVRYGGRS VRRDAIVSWG PNNNSFVVWN  60
TPEFARDLLP KHFKHNNFSS FVRQLNTYGF RKVDPDRWEF ANEGFLRGQK HLLKTITRRK  120
PSHVQSQPHP PQPQNSAVAA CVEVGKFGLE EEIEQLKRDK NVLMQELVRL RQQQQTTDHQ  180
LQTLGDRLHG MEQRQQQMMA FLAKAMQSPG FLAQLVQQND SNRRITAGNK KRRFPKQRSE  240
LNVESSSPDG QIIKYQPLIN EAAKAMLMQI LKLDSSPRLD PLNNSDGFLI DNFPSQLNSV  300
ENISSTTRTS RVTLKEVPTT SGIPYLPSNS GVSSSASTPS TSTSIVDMVK EPIAPVLSPM  360
QGVVTNGDSV NIVPENYSPL ESDNGYVPNI PPSVDEHVPL DLDSLTDDIG FLNDVENDMG  420
TLPGIEDPFW EQFLDCPVPG NDDSDMQENG EVVIEEQNGW SNAQNMDNLT EQMGHLTSEN  480
KK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-113	HSF family protein