PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.1174

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 400aa MW: 43623.5 Da PI: 4.1412

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.1174	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	40.4	9e-13	18	124	10	127
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 tdee+v ++L + g++++ +vi+ v+ ++++P++ p e w+ +++++++++++ ++ +gyW++ evm.model.AsparagusV1_08.1174 18 TDEEIV-QFLWGRKVGDPIPS-NVITGVNPFSIDPRSSP------EGIWFLYTSEESQSHNEGGIIKV-VNGYWRSMDD- 87 8999.88988888999999.89*********99......34699999998888877777765.568866. PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 ++l+ ++ +vg k+t fy g+ap g +t W m+ey evm.model.AsparagusV1_08.1174 88 CRILA-STPAVGRKTTRQFYVGQAPFGDQTGWKMQEYF 124 55666.6889*************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MCPLPPDSSP LDIGEQSTDE EIVQFLWGRK VGDPIPSNVI TGVNPFSIDP RSSPEGIWFL 60 YTSEESQSHN EGGIIKVVNG YWRSMDDCRI LASTPAVGRK TTRQFYVGQA PFGDQTGWKM 120 QEYFADQIVA QDCSTLCRIF LQNDEVLDTG EQYDPVNPGD ADGEYIEAAL LSLLEQDDRN 180 SSRDGAVGSQ AEQKSSQVAD EDKQRQLESS SRHFEDSVNE NSMEHMQAGY DFSKEDFLEL 240 KDLYDPISSS SSSDNSSFVS MNSDECFDAE ALLRDIENEG GLDIEEHVDY RLSVATAVRS 300 NRVVIQPSPE AFSNCRNLVV NESETTTATT PAYPVLPSSN IDQQNDSEGS TSSSSKGKGS 360 NGSGSQCGSS QGGSPSRSSG SKFRKIGKLG RKYCCLGPF*

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MCPLPPDSSP LDIGEQSTDE EIVQFLWGRK VGDPIPSNVI TGVNPFSIDP RSSPEGIWFL  60
YTSEESQSHN EGGIIKVVNG YWRSMDDCRI LASTPAVGRK TTRQFYVGQA PFGDQTGWKM  120
QEYFADQIVA QDCSTLCRIF LQNDEVLDTG EQYDPVNPGD ADGEYIEAAL LSLLEQDDRN  180
SSRDGAVGSQ AEQKSSQVAD EDKQRQLESS SRHFEDSVNE NSMEHMQAGY DFSKEDFLEL  240
KDLYDPISSS SSSDNSSFVS MNSDECFDAE ALLRDIENEG GLDIEEHVDY RLSVATAVRS  300
NRVVIQPSPE AFSNCRNLVV NESETTTATT PAYPVLPSSN IDQQNDSEGS TSSSSKGKGS  360
NGSGSQCGSS QGGSPSRSSG SKFRKIGKLG RKYCCLGPF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	5e-13	NAC family protein