PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.116
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 325aa    MW: 35775 Da    PI: 4.4954
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.116genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.56.1e-1117858128
                           NAM  58 wyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlsk....kgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                   +yfF++r++++++ +kr +r + + g W      k+++++    ++ ++g +  L+f    ++++ ++t W++heyrl
  evm.model.AsparagusV1_08.116   1 MYFFTRRRRASSNgSKRFSRtVDEGGLWDGHAAGKAIHKAgnggEKIEIGHRAQLAFKlFDDKKSKKSTLWILHEYRL 78 
                                   59*********9934588995566899**9999999999887666667*********9533555557899******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MYFFTRRRRA SSNGSKRFSR TVDEGGLWDG HAAGKAIHKA GNGGEKIEIG HRAQLAFKLF  60
DDKKSKKSTL WILHEYRLVD DKADDVVLCR IHKRKGKDED EEEVAPVFIN TQQTADEQTS  120
LPAAQPLVEA DAVAAADVDD DDLSLVRLLE EELVEVEVEE QRRVKRQRIG GGGGGGAHQI  180
PMNQGLLRSP MDKRCAKRQR IEQEEAHQAS AVDADDGLTM TLDEINTILD ELPSNTSQQQ  240
PADPVDVEQL LKCLEVEPST SFDGLSFCLD GHILQETPSP AEGERSVKGG EEIMSAMQDC  300
LNMPLPAYAV GDEYCYDLLA LGIC*