PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.103

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

GRF

Protein Properties

Length: 302aa MW: 33559.2 Da PI: 9.3811

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.103	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.2	8.2e-25	64	108	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e+ evm.model.AsparagusV1_08.103 64 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGKNRSRKPVES 108 79****************************************986 PP
2	QLQ	49.6	1.2e-17	4	38	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FTaaQ+q+L++Q+l++KyL+a+ vPp+Ll++i++ evm.model.AsparagusV1_08.103 4 SPFTAAQWQELEHQALILKYLLAG--VPPDLLVPIRR 38 89******************97..79****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MLRSPFTAAQ WQELEHQALI LKYLLAGVPP DLLVPIRRSF GSLPAYFYPN PALSYCSYFG 60 KKLDPEPGRC RRTDGKKWRC SKDAYPDSKY CERHMHRGKN RSRKPVESQT LSQLQSSSST 120 VTSLNPTGTI SRSVQNSPLP YSMSSSSSAQ ASTLGAYGTG NKDYRYLNGV KTELNMHSFA 180 PEASGSIKGL GVDPSLSSSW TSRDSSFSLS NSRNSSHSYS QLQQQQSSYL GSDFGLLQPV 240 KEETNSLRPF FDEWPKTREL WSDLEDERSN QISFSNTQLS MSIPMASSDF STTASRSTNN 300 N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-42	GRF family protein