PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.683
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 142aa    MW: 16480.3 Da    PI: 5.3915
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.683genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.94.8e-2554140188
                          FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtk 80 
                                   +fYneYA++ GFs+r+++     ++g  t+rtfvC keg r+ +k++ + +r++r etrt+C a + +k+ + +gk+ v++
  evm.model.AsparagusV1_07.683  54 DFYNEYARSEGFSIRRAAYAAD-KQGVLTSRTFVCCKEGLRKADKRD-DLTRNPRGETRTNCGAIMGIKLVRrTGKYSVYR 132
                                   6***************987766.8899*****************999.9*********************999******** PP

                          FAR1  81 leleHnHe 88 
                                   +++eHnH+
  evm.model.AsparagusV1_07.683 133 FSEEHNHH 140
                                   *******5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MKNENVMRIE RTSEEQEGIM EENAEENNDS LECSKEDLKP KFFMEFDSEI DAYDFYNEYA  60
RSEGFSIRRA AYAADKQGVL TSRTFVCCKE GLRKADKRDD LTRNPRGETR TNCGAIMGIK  120
LVRRTGKYSV YRFSEEHNHH P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-18FAR1 family protein