PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.533

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Protein Properties

Length: 897aa MW: 98467.1 Da PI: 6.6988

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.533	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	2e-18	307	406	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkeg 77 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++g evm.model.AsparagusV1_07.533 307 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLKIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAG 386 99************************555566778***********99899999999.*********** PP -EEEEEE-SSSEE..EEEEE- CS B3 78 DfvvFkldgrsefelvvkvfr 98 D+v+F++++ e++l +++++ evm.model.AsparagusV1_07.533 387 DTVTFSRMD-PEGKLIMGFRK 406 ****876.77777777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 897 aa Download sequence
MTSKRCMNGG CGATLAAEDW RRGWALRSGG FATLCDKCGM AYEQSVFCDL FHQKESGWRE 60 CLLCGKRLHC GCIASKSLFE LLDGGGVQCI SCMKNSGLSF IPSETIQEFL PQSSQRVLSL 120 AGRSQKDEKA NEDSNVRVDE DVISKGKAIQ LGKNMEVNGQ NNMLLARRES LNGSFGHIKR 180 EQMAFHAGKA CLNISLGNSN QRTTMEPALS TGIRPSSGVE DGRDQSRSLS ALQQAQRARH 240 LLPKPSKTGQ TFSSEASKEM LSNMRVARPP AEGRGRNQLL PRYWPRITDQ ELQQISGDSN 300 STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQPE GLPLKIQDAK GKEWHFQFRF 360 WPNNNSRMYV LEGVTPCIQS LQLQAGDTVT FSRMDPEGKL IMGFRKATNS VPLQDSQISA 420 IANAGLGNET FFSGVNENLS IVSGYSGLLQ SLKGTAAPRL SYLSEHLNLA DSDVSWQKTD 480 THGGRSNDGF LLQPSLAQEK KRSRNIGGKS KRLHMDNDDA LELKLSWEEA QDLLRPPPIA 540 KPSVVMIEDQ EFEEYEEPPV FGKRTIFTAQ LSGEQDQWIQ CDDCFKWRRL PVDVLVPSNW 600 TCADNTCDPR RSSCSVPDEL SPTEIHNLLR QDAEIKMMRT SISKQNTPDF EASGLDALAT 660 AASIGDTTNQ ATVSASATTT KHPRHRPGCT CIVCIQPPSG KGPKHHPNCT CNVCLTVKRR 720 FKTLMLRKKK RQSEREEAEA NKRLMLPWGA KEEIEGSSIQ KENELGMMLP WGAKEEIEGS 780 SIQKENELGM DAGKASVVGD IDTGKGKIDL NCQPEGLQSS SRVSMMSLLH VASLPLENYL 840 KQNGLTSLTC EQQVSSSSVT VPQAMPVDES EERTPDEEGS GDEGHIGSET AKSDAS*

Sequence ? help Back to Top

Protein Sequence Length: 897 aa Download sequence

MTSKRCMNGG CGATLAAEDW RRGWALRSGG FATLCDKCGM AYEQSVFCDL FHQKESGWRE  60
CLLCGKRLHC GCIASKSLFE LLDGGGVQCI SCMKNSGLSF IPSETIQEFL PQSSQRVLSL  120
AGRSQKDEKA NEDSNVRVDE DVISKGKAIQ LGKNMEVNGQ NNMLLARRES LNGSFGHIKR  180
EQMAFHAGKA CLNISLGNSN QRTTMEPALS TGIRPSSGVE DGRDQSRSLS ALQQAQRARH  240
LLPKPSKTGQ TFSSEASKEM LSNMRVARPP AEGRGRNQLL PRYWPRITDQ ELQQISGDSN  300
STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQPE GLPLKIQDAK GKEWHFQFRF  360
WPNNNSRMYV LEGVTPCIQS LQLQAGDTVT FSRMDPEGKL IMGFRKATNS VPLQDSQISA  420
IANAGLGNET FFSGVNENLS IVSGYSGLLQ SLKGTAAPRL SYLSEHLNLA DSDVSWQKTD  480
THGGRSNDGF LLQPSLAQEK KRSRNIGGKS KRLHMDNDDA LELKLSWEEA QDLLRPPPIA  540
KPSVVMIEDQ EFEEYEEPPV FGKRTIFTAQ LSGEQDQWIQ CDDCFKWRRL PVDVLVPSNW  600
TCADNTCDPR RSSCSVPDEL SPTEIHNLLR QDAEIKMMRT SISKQNTPDF EASGLDALAT  660
AASIGDTTNQ ATVSASATTT KHPRHRPGCT CIVCIQPPSG KGPKHHPNCT CNVCLTVKRR  720
FKTLMLRKKK RQSEREEAEA NKRLMLPWGA KEEIEGSSIQ KENELGMMLP WGAKEEIEGS  780
SIQKENELGM DAGKASVVGD IDTGKGKIDL NCQPEGLQSS SRVSMMSLLH VASLPLENYL  840
KQNGLTSLTC EQQVSSSSVT VPQAMPVDES EERTPDEEGS GDEGHIGSET AKSDAS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	718	729	KRRFKTLMLRKK
2	718	731	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein