PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.498

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 1667aa MW: 183905 Da PI: 7.2476

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.498	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22	3.8e-07	770	811	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE + d + +G++ +++I++ + ++t +c+++++k evm.model.AsparagusV1_07.498 770 PWTQEEKGVFMDMLATYGKD-FAKISSFLT-HKTTADCIEFYYK 811 8***************99.****9.*********98 PP
2	Myb_DNA-binding	24.3	7.2e-08	983	1023	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W eE ++++a +G++ +++I++++g ++++ qc+ ++ evm.model.AsparagusV1_07.498 983 DWIDEEKSIFIRALSSYGKD-FAKISQCVG-TKSRDQCRIFFS 1023 6999************99.*****.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1667 aa Download sequence
MGGSTRKREQ EGGTMNRNPR VSALESVEIW IIIWFGITGA IDAPLLLLNF MPPEPLPWDR 60 KDFVFKDRKH DRIASNDALS GGNSTSRWRD PYHFPRASPR RPPPSYHRQN GSYYQLYDES 120 NGHGCTPSRS DDGYRSSNGR YNGGRSSSRE SRGSFRRSPY FDGYEPSHVT SQRSVAVPIT 180 SPPPLQSRDL HGGGDDQRSD RDRDRDRYRD KDNSLGSIDW KPLKWSRQSS ISSSKSIRSD 240 VEEAVNGSLE VSVPNLGKET PVRSPVSSPA PLEDGVPKKK PRLTWGQGLA KYEKQKVEGS 300 SNSGKDQVSE SSLRVMGIAG STSPATPCSA ACPSPGTENM PFSKVTNIDN DTDNHSQTSV 360 VGLQNHWEEL LTKLDELPPI STLASLLNDM LQPEDACTGD SSSNRNNCAN KLPLFKADIS 420 KELERTECEI DSLENELKSF DRMERVILPV KITLAIKVDS SSLPCQQSDD GSVQVSSNST 480 PVNPSETAAV EEVLLPICSS GEPEIEAKWS HKDILRTASH NNSESTSSGD GGGMSLDFEE 540 RTVKENSSEH FSHLDAASSN ANLDLNVGSN EKVENNLVAL IMASNREAAK KCSHVFDAAL 600 CMAWQQSDIW GPDRMLSFRK NAMQVREKLA LRKHQIKFKE RILTLKFRAF HHLWKEDLRL 660 LSVRKQRPKS QKRFELCSRS AQSSSQKHRS SIRSRFTLPA GNLTLVPTAD IVDFTSRLLS 720 DSLAKLHRQN LKMPALILDE KERSFSRFIT KNNLIEDPLS FEKQRLMINP WTQEEKGVFM 780 DMLATYGKDF AKISSFLTHK TTADCIEFYY KNHKSESFRE VKKQLNLRKQ RQCLSTNMYM 840 VTSGKKWNRE SNAASLDMLG TVSVAVAHNS SSGRSQQKYT GRSVIPSYHG SKVSRGTYHH 900 HSFERPGKAE ISRHEKEIAG IDVLAGYGSL SSEAVSSCVT SSVSPPEKMS SVIMDMPVTP 960 EFTQAIEEED TCSDEGCAGD SLDWIDEEKS IFIRALSSYG KDFAKISQCV GTKSRDQCRI 1020 FFSKARKCLS LDQIHPGSGN GGTPVSDANG RSDTDDACAA ELDSAICSTQ SCSRMDPDFM 1080 QSVTNTGVEG IIHDGNISSK AETDRSCKYG AGGFNQEEAD GKVDRLESVP RVEEVEIEIK 1140 NLQSKVMEGI GDAVVKHGEL VPSHDDAESG RGVGKVENDT SSSFSEDEKM KIQTTDEVQQ 1200 GVISKLKSEV ELQQVPMMSE TVSGERQEKK VDTYNSSSVN FSFSVESTVK ETDSYTASKS 1260 KVGPNRTFNF STHEQSMPLD LLSQKRSQLL SAKERSYSAP LSTVMPEPSS IWSDGSFRVQ 1320 SHSTLDFNDH VLKPHQGSAS KDLCQQRQSR INLNQVHQSS HVLSGYPVQA LNQKDSKREA 1380 IISSGKQTMH EGHLNRSLSS QLCRHFVPDI QNEKREGSVP SRPGVLFFDS KEDKSDSQLR 1440 PCSINPSQET EEQSTHRTGD VKLFGQILTN PHSHQKSNSS SQDIDSQPPS QKQKKPATVT 1500 ISTSRTSSSS LFPPKAESIS QSSLQEVPLQ SYGYWDGSRI QTGFSSLPEQ AVMLAAYQGS 1560 SAGTPFYPPA KDIGVASSSG AASANGAAKN YQQAYGQPEM QKRSRFELVS GFQQGGRPAL 1620 ARLGINGGSR SVLVGSNGVS DPVAALKIAK LYTGEVESWT RDVNSR*

Sequence ? help Back to Top

Protein Sequence Length: 1667 aa Download sequence

MGGSTRKREQ EGGTMNRNPR VSALESVEIW IIIWFGITGA IDAPLLLLNF MPPEPLPWDR  60
KDFVFKDRKH DRIASNDALS GGNSTSRWRD PYHFPRASPR RPPPSYHRQN GSYYQLYDES  120
NGHGCTPSRS DDGYRSSNGR YNGGRSSSRE SRGSFRRSPY FDGYEPSHVT SQRSVAVPIT  180
SPPPLQSRDL HGGGDDQRSD RDRDRDRYRD KDNSLGSIDW KPLKWSRQSS ISSSKSIRSD  240
VEEAVNGSLE VSVPNLGKET PVRSPVSSPA PLEDGVPKKK PRLTWGQGLA KYEKQKVEGS  300
SNSGKDQVSE SSLRVMGIAG STSPATPCSA ACPSPGTENM PFSKVTNIDN DTDNHSQTSV  360
VGLQNHWEEL LTKLDELPPI STLASLLNDM LQPEDACTGD SSSNRNNCAN KLPLFKADIS  420
KELERTECEI DSLENELKSF DRMERVILPV KITLAIKVDS SSLPCQQSDD GSVQVSSNST  480
PVNPSETAAV EEVLLPICSS GEPEIEAKWS HKDILRTASH NNSESTSSGD GGGMSLDFEE  540
RTVKENSSEH FSHLDAASSN ANLDLNVGSN EKVENNLVAL IMASNREAAK KCSHVFDAAL  600
CMAWQQSDIW GPDRMLSFRK NAMQVREKLA LRKHQIKFKE RILTLKFRAF HHLWKEDLRL  660
LSVRKQRPKS QKRFELCSRS AQSSSQKHRS SIRSRFTLPA GNLTLVPTAD IVDFTSRLLS  720
DSLAKLHRQN LKMPALILDE KERSFSRFIT KNNLIEDPLS FEKQRLMINP WTQEEKGVFM  780
DMLATYGKDF AKISSFLTHK TTADCIEFYY KNHKSESFRE VKKQLNLRKQ RQCLSTNMYM  840
VTSGKKWNRE SNAASLDMLG TVSVAVAHNS SSGRSQQKYT GRSVIPSYHG SKVSRGTYHH  900
HSFERPGKAE ISRHEKEIAG IDVLAGYGSL SSEAVSSCVT SSVSPPEKMS SVIMDMPVTP  960
EFTQAIEEED TCSDEGCAGD SLDWIDEEKS IFIRALSSYG KDFAKISQCV GTKSRDQCRI  1020
FFSKARKCLS LDQIHPGSGN GGTPVSDANG RSDTDDACAA ELDSAICSTQ SCSRMDPDFM  1080
QSVTNTGVEG IIHDGNISSK AETDRSCKYG AGGFNQEEAD GKVDRLESVP RVEEVEIEIK  1140
NLQSKVMEGI GDAVVKHGEL VPSHDDAESG RGVGKVENDT SSSFSEDEKM KIQTTDEVQQ  1200
GVISKLKSEV ELQQVPMMSE TVSGERQEKK VDTYNSSSVN FSFSVESTVK ETDSYTASKS  1260
KVGPNRTFNF STHEQSMPLD LLSQKRSQLL SAKERSYSAP LSTVMPEPSS IWSDGSFRVQ  1320
SHSTLDFNDH VLKPHQGSAS KDLCQQRQSR INLNQVHQSS HVLSGYPVQA LNQKDSKREA  1380
IISSGKQTMH EGHLNRSLSS QLCRHFVPDI QNEKREGSVP SRPGVLFFDS KEDKSDSQLR  1440
PCSINPSQET EEQSTHRTGD VKLFGQILTN PHSHQKSNSS SQDIDSQPPS QKQKKPATVT  1500
ISTSRTSSSS LFPPKAESIS QSSLQEVPLQ SYGYWDGSRI QTGFSSLPEQ AVMLAAYQGS  1560
SAGTPFYPPA KDIGVASSSG AASANGAAKN YQQAYGQPEM QKRSRFELVS GFQQGGRPAL  1620
ARLGINGGSR SVLVGSNGVS DPVAALKIAK LYTGEVESWT RDVNSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-100	MYB family protein