PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3627
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YA
Protein Properties Length: 320aa    MW: 35238.9 Da    PI: 8.1651
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3627genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.32e-31193249158
                      CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                                    +ep+YVNaKQ+++Il+RR+ Rak+e+++kl +k+rkpylheSRh hA++R+Rg gGrF
  evm.model.AsparagusV1_07.3627 193 EEPIYVNAKQFHAILRRRELRAKQEAQNKL-IKGRKPYLHESRHMHAMKRARGVGGRF 249
                                    69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSLEHVEGFE MRNIGNKDSK ESSAYSTPNC VNLPSWWNSS ASNYPPSYPK NLYMNMDPLA  60
PQENQLKYLG AHIADQDSSS THSSDQSHQE LSGSTESKSQ GQCISAQSGN EDAFERHLEG  120
HLKSASSSGA PEVALPSAKL DYNPSIACIP YPYTDPYYGG VLAPYGSHAI IHPQLLGMAP  180
SSRVPLPHEQ AEEEPIYVNA KQFHAILRRR ELRAKQEAQN KLIKGRKPYL HESRHMHAMK  240
RARGVGGRFL NTKKLQQRTE PSENRTNAAG LAGSDVSSIS NGNGNDNGGF HHHQNHFDFK  300
SHIMGNGQNS GQHRVSVMR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.14e-45NF-YA family protein