PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.275

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

C2H2

Protein Properties

Length: 168aa MW: 18022.5 Da PI: 10.9733

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.275	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cg F + L H+r+H evm.model.AsparagusV1_07.275 77 QCSICGHEFATGQALGGHMRRH 98 7********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MIRTRHSRRS SIALSGGGGV PGTGRDHNRK RVFECQDLPV SNSLPFKRLG VTGRVTRNRG 60 LATVTRAGPK CKAQSPQCSI CGHEFATGQA LGGHMRRHRA DNDGFGHAGQ KAIGRRVDLW 120 DLNLPASGND AEHRDLGLVG LELELGLGLG LGAHYVHKTI PMVDCFR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-09	C2H2 family protein