PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.2594

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 405aa MW: 45476.4 Da PI: 4.41

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.2594	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.3	1.5e-23	16	146	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratks 80 +Gf+F+Ptd e++++y +++ +g++ + ik+ ++y ++Pw+ + + + ++e+yfF+ r+ ++ +++ ++r+ + evm.model.AsparagusV1_07.2594 16 VGFKFKPTDVEILDHYVRRRFSGSPEPN-FLIKSEEVYAYKPWKPSEapS-VSVQQEMYFFTLRRPAS-KKRVSRRVDEG 92 7**********************877.56*********974233.3346799*98875.44566669999 PP NAM 81 gyWkatgkdkevlsk.....kgel....vglkktLvfykgrapkgektdWvmheyrl 128 g W + +k+++++ k + vg ++ L f +++++k + +W+mheyr+ evm.model.AsparagusV1_07.2594 93 GKWDCKVAEKAIYKQevrdgK--KvnvlVGYRNQLSFRDAEKRK-MHDQWIMHEYRV 146 **********8776531..25677*****9766666.899*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MALVAVGDQQ EYFFDVGFKF KPTDVEILDH YVRRRFSGSP EPNFLIKSEE VYAYKPWKPS 60 EAPSVSVQQE MYFFTLRRPA SKKRVSRRVD EGGKWDCKVA EKAIYKQEVR DGKKVNVLVG 120 YRNQLSFRDA EKRKMHDQWI MHEYRVDESV LGFRSEIQDK LVFCKIYKKK EYIGEGEGGE 180 EEEERCAKRQ RVCPENYEST ANGIPPPAAE TPSSSTGGAH SETSSSSSPI PLAAVDYGAS 240 YSNYLIDDHL QCPEFDPVIS LDDFELSAAA LALPAAETSP SACIVSPISR LMDGTHDEHE 300 FASASVAANV KNEPDADQTS TASLEVVLAS AAEDDDDAFY AKLSEEFNVA HPEIANLAED 360 YPADVITLYP DARDFVPIEY FDDYFTANED RHLDQTFLFQ SSIY*

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MALVAVGDQQ EYFFDVGFKF KPTDVEILDH YVRRRFSGSP EPNFLIKSEE VYAYKPWKPS  60
EAPSVSVQQE MYFFTLRRPA SKKRVSRRVD EGGKWDCKVA EKAIYKQEVR DGKKVNVLVG  120
YRNQLSFRDA EKRKMHDQWI MHEYRVDESV LGFRSEIQDK LVFCKIYKKK EYIGEGEGGE  180
EEEERCAKRQ RVCPENYEST ANGIPPPAAE TPSSSTGGAH SETSSSSSPI PLAAVDYGAS  240
YSNYLIDDHL QCPEFDPVIS LDDFELSAAA LALPAAETSP SACIVSPISR LMDGTHDEHE  300
FASASVAANV KNEPDADQTS TASLEVVLAS AAEDDDDAFY AKLSEEFNVA HPEIANLAED  360
YPADVITLYP DARDFVPIEY FDDYFTANED RHLDQTFLFQ SSIY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	6e-16	NAC family protein