PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.1613 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | GRAS | ||||||||
Protein Properties | Length: 157aa MW: 18292 Da PI: 7.7727 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 194.3 | 7.7e-60 | 2 | 151 | 225 | 374 |
GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae 304 +++L+ +++lsPk+vvv+eqe++hn+++ erf+eal++y++lfd+le ++pr s er+ vE+ llg+ei+n++aceg e evm.model.AsparagusV1_07.1613 2 ERFLSSLWGLSPKIVVVTEQESNHNGATMNERFVEALNFYATLFDCLELTVPRGSTERMRVEKLLLGEEIKNIIACEGVE 81 579***************************************************************************** PP GRAS 305 rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 rrerhe+le+W +r+e+aGF+ vpls++ qa+++l+ ++ d y+v+ee g+++++W+dr+L+svSaWr evm.model.AsparagusV1_07.1613 82 RRERHEKLERWVQRFEAAGFGRVPLSYYGLLQARRMLQSFGCDAYKVKEEGGCFFMCWQDRALFSVSAWR 151 *****************************************999*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MERFLSSLWG LSPKIVVVTE QESNHNGATM NERFVEALNF YATLFDCLEL TVPRGSTERM 60 RVEKLLLGEE IKNIIACEGV ERRERHEKLE RWVQRFEAAG FGRVPLSYYG LLQARRMLQS 120 FGCDAYKVKE EGGCFFMCWQ DRALFSVSAW RCRRYD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 3e-77 | GRAS family protein |