PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.1112

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

SBP

Protein Properties

Length: 1009aa MW: 112996 Da PI: 6.5377

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.1112	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	124.9	3.3e-39	126	203	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv gC adls+ak+yhrrhkvCe+h+ka++++v + qrfCqqCsrf l+efD++krsCrrrLa+hn+rrrk+++ evm.model.AsparagusV1_07.1112 126 VCQVVGCGADLSDAKDYHRRHKVCEMHAKASSAMVGSVIQRFCQQCSRFQLLEEFDDGKRSCRRRLAGHNKRRRKTHP 203 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1009 aa Download sequence
MDANFSKEQG EFDNAETSNG SGKKKKSVEW GLNDWKWDGH HFVATPLKNK QLVAVPSLNS 60 SSSCLEETDQ LEKRRKVLVG EDDGLCGDDG TLSFKLGERR YPIAEGELED NGKRCNLMGG 120 TSSRLVCQVV GCGADLSDAK DYHRRHKVCE MHAKASSAMV GSVIQRFCQQ CSRFQLLEEF 180 DDGKRSCRRR LAGHNKRRRK THPDTSISGS PLTDDKASSY LLISLLKILT DLHSNKSDKS 240 KDQELVSHLL ENIAGLAGSS DSGNHSGTLK ASQGLYVSGT ARTPSESANA LLPKSVEEFS 300 RNPLCSPAKA TCNRDIQDVP WRSVNNSLPV PIATMGMPPR HNIVESYPSK TVQAVSSQSS 360 PLLKLADDVL SAQQKLSAES TEARFRINDF DLNCTYNETR DCGGCEQSVS LNRRIDSISL 420 PSSMLKFSHQ SSPPQTSGNS NSSSQSLSNS DGEAQSRTDR IIFKLFGKNP NDFPLLLQTQ 480 ILDWLSNSPT DMESYIRPGC VVLTVYLRLD DSIWEELNHD LCSSLNRLLR VCGDAFWMTG 540 WLYAQIQNCM AFVYDGSIVL QISPLLLENA NNCQIVSVTP IAVASSARVS FTVQGFNLAQ 600 PTARLLCAFE GKYLVAEAAH LLVGETNSSR EYEDYQYLRF SCSFPDATGR GVIEVEGDGL 660 SSEFFPFVVA EEDVCSEIRM LENSINSDDF PRNQAMNFLN EMGWLLRRSN LMLRSKQVNF 720 YPDLFSLQRF RWLMTFAMDR EWCAVVKKLM DIIFQGVIDL GGSTPSELVL SENLLHIAVR 780 KKSKFMVKFL LNYKADTVFN ETNTDCFLFR PDMLGTLNMT PLHIAASLSC AEEVLDALIN 840 DPGQYGIKAW KNTRDITGFT PDDYAHARGH QSYIHLVQKK IDTITEKGQV SLDIQGSNGH 900 KSSKLTRFNI ENSRFTQTQQ SSCMLCDWQX XXXALWAIHC CTDRFFYRWW VSLPFVFVWP 960 CCLKARQKLP LCILPLDGSL CVMAQCEDSM MIRLVLWMMN WLNSEIRG*

Sequence ? help Back to Top

Protein Sequence Length: 1009 aa Download sequence

MDANFSKEQG EFDNAETSNG SGKKKKSVEW GLNDWKWDGH HFVATPLKNK QLVAVPSLNS  60
SSSCLEETDQ LEKRRKVLVG EDDGLCGDDG TLSFKLGERR YPIAEGELED NGKRCNLMGG  120
TSSRLVCQVV GCGADLSDAK DYHRRHKVCE MHAKASSAMV GSVIQRFCQQ CSRFQLLEEF  180
DDGKRSCRRR LAGHNKRRRK THPDTSISGS PLTDDKASSY LLISLLKILT DLHSNKSDKS  240
KDQELVSHLL ENIAGLAGSS DSGNHSGTLK ASQGLYVSGT ARTPSESANA LLPKSVEEFS  300
RNPLCSPAKA TCNRDIQDVP WRSVNNSLPV PIATMGMPPR HNIVESYPSK TVQAVSSQSS  360
PLLKLADDVL SAQQKLSAES TEARFRINDF DLNCTYNETR DCGGCEQSVS LNRRIDSISL  420
PSSMLKFSHQ SSPPQTSGNS NSSSQSLSNS DGEAQSRTDR IIFKLFGKNP NDFPLLLQTQ  480
ILDWLSNSPT DMESYIRPGC VVLTVYLRLD DSIWEELNHD LCSSLNRLLR VCGDAFWMTG  540
WLYAQIQNCM AFVYDGSIVL QISPLLLENA NNCQIVSVTP IAVASSARVS FTVQGFNLAQ  600
PTARLLCAFE GKYLVAEAAH LLVGETNSSR EYEDYQYLRF SCSFPDATGR GVIEVEGDGL  660
SSEFFPFVVA EEDVCSEIRM LENSINSDDF PRNQAMNFLN EMGWLLRRSN LMLRSKQVNF  720
YPDLFSLQRF RWLMTFAMDR EWCAVVKKLM DIIFQGVIDL GGSTPSELVL SENLLHIAVR  780
KKSKFMVKFL LNYKADTVFN ETNTDCFLFR PDMLGTLNMT PLHIAASLSC AEEVLDALIN  840
DPGQYGIKAW KNTRDITGFT PDDYAHARGH QSYIHLVQKK IDTITEKGQV SLDIQGSNGH  900
KSSKLTRFNI ENSRFTQTQQ SSCMLCDWQX XXXALWAIHC CTDRFFYRWW VSLPFVFVWP  960
CCLKARQKLP LCILPLDGSL CVMAQCEDSM MIRLVLWMMN WLNSEIRG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	50	KKKKSVEWGLNDWKWDGHHFVATPLKNK
2	196	202	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein