PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1076
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GeBP
Protein Properties Length: 286aa    MW: 32268.7 Da    PI: 6.5336
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1076genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573103.41.9e-32137236297
                         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgke 77 
                                    lfqrlw+++Dei +L  +++f++++g+   +++ d+  fye++k++++++++k+ql+eK+rrLKkK+++  ++ a++g +
  evm.model.AsparagusV1_07.1076 137 LFQRLWTDDDEIKILTRFLEFTSSRGTtfASHQyDTGPFYEQIKNELQLDFNKNQLIEKLRRLKKKYRNTATRmANHGPD 216
                                    79************************99877778*************************************998999*** PP

                         DUF573  78 psfskehdqkifelskkiWg 97 
                                    ++f+++h++ +++++k+iW 
  evm.model.AsparagusV1_07.1076 217 FTFRSPHEKATYDIAKRIWS 236
                                    *******************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MAPEDEDPVA FNDEDDDLED TDDTDMDDRR RCPPRAPGSA RPRPPQATRS NSSRLQSRFQ  60
PDQLDPICLI NPNLLVGATS SAIACAQNAL LQVTRDRSSI HRRPALPATC SLADVKAAEF  120
EERRPQPSTS LDESRRLFQR LWTDDDEIKI LTRFLEFTSS RGTTFASHQY DTGPFYEQIK  180
NELQLDFNKN QLIEKLRRLK KKYRNTATRM ANHGPDFTFR SPHEKATYDI AKRIWSAGIK  240
RSRESDDEDL NPYANNTSDA GANFLTGRPG DARGPRKGVA AKESL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.16e-40GeBP family protein