PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.694

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 413aa MW: 46544.9 Da PI: 8.7222

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.694	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57	6.8e-18	26	104	51	128
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128 ++++++wyfF+ r +ky gkr+ r+t +g+Wkat d+ +++ +g+++g + tL f g++++g+ + W+m eyr+ evm.model.AsparagusV1_06.694 26 SSEQHRSWYFFTDRTRKYLGGKRPARSTPNGFWKATEADTLIKD-QGKVIGRRMTLKFLWGHQREGKhwDSGWMMREYRI 104 3446679*********************************99.999*******8888888744799****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MPTGLFAQNN EAKEALKTVL SEEYQSSEQH RSWYFFTDRT RKYLGGKRPA RSTPNGFWKA 60 TEADTLIKDQ GKVIGRRMTL KFLWGHQREG KHWDSGWMMR EYRIEEFQIP SSQKRKGKTP 120 KNPAGSECNM KLDEAVLCKV YKVQNKNAGR KRHEASRNSS SDSLLDVVYP IQGQSTIQPS 180 GLFFPVPCPG YDPNHNTNGL IFSRPNERGR LPNRVNPNYF STMNQTRSYP TKSVVYPSLP 240 NWCPSGSEPC LYEGESNLSN FLNVNGMCVQ LALSQDIHQR QLSICPEQSE NLSSGAVFDV 300 ARRTQSLSQY STEGLPSSHP SPVPCSATDS MYNNGWRLFN QVNSSYSSTV SQDQSYETNS 360 VVNPNLPTWC IGSTNLNSFY IDPSQSGFLD ENGFFAVSDT QRLRPNYLSI IP*

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MPTGLFAQNN EAKEALKTVL SEEYQSSEQH RSWYFFTDRT RKYLGGKRPA RSTPNGFWKA  60
TEADTLIKDQ GKVIGRRMTL KFLWGHQREG KHWDSGWMMR EYRIEEFQIP SSQKRKGKTP  120
KNPAGSECNM KLDEAVLCKV YKVQNKNAGR KRHEASRNSS SDSLLDVVYP IQGQSTIQPS  180
GLFFPVPCPG YDPNHNTNGL IFSRPNERGR LPNRVNPNYF STMNQTRSYP TKSVVYPSLP  240
NWCPSGSEPC LYEGESNLSN FLNVNGMCVQ LALSQDIHQR QLSICPEQSE NLSSGAVFDV  300
ARRTQSLSQY STEGLPSSHP SPVPCSATDS MYNNGWRLFN QVNSSYSSTV SQDQSYETNS  360
VVNPNLPTWC IGSTNLNSFY IDPSQSGFLD ENGFFAVSDT QRLRPNYLSI IP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	4e-17	NAC family protein