PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.495
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family CO-like
Protein Properties Length: 377aa    MW: 41634.4 Da    PI: 4.6161
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.495genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.13.2e-071861339
                      zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39
                                  +r C+ +   +++++C  ++ +lC++C ++ H+        H+v
  evm.model.AsparagusV1_06.495 18 ARPCDSCVCRRARWYCAADDAFLCQNCDSSVHSAnplaqrhHRV 61
                                  578*****999*********************668888886665 PP
2CCT68.32.1e-23320363144
                           CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                                   Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a
  evm.model.AsparagusV1_06.495 320 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 363
                                   9*****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MICPKSQTVA TVVGGKTARP CDSCVCRRAR WYCAADDAFL CQNCDSSVHS ANPLAQRHHR  60
VRLQTIPVSK PVVPEIETSA EDTNNDEQLL YRVPIFDPVL AEFCSPPLAV DETSSETKPN  120
VQLTDTNTKA RNSNEILSGF LQSDAELADF AADMESLLGR GLDNGSFSME ELGLVDTSYS  180
TPDESERVKE EYVENDADGS VKLYEEIDLS REALEINFDC CRSGDEHQEE MAETEAAVEG  240
EVVSGEENQG GKKIGLILDY DAVALEWSAQ GSSLSPWVNG ERPQLGPGAR WLDYMGMWGG  300
GEVQGLVAGE IGGSHFDEGR EARVSRYREK RRTRLFSKKI RYEVRKLNAE KRPRMKGRFV  360
KRASFAAPAG IPAFKY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1331347RRTRLFSKKIRYEVRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25440.13e-74CO-like family protein