PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.164

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 1856aa MW: 208137 Da PI: 5.8131

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.164	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40	8.8e-13	37	80	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+ Ede+l d+v++ G g+W+t+ + g++R +k+c+ rw evm.model.AsparagusV1_06.164 37 LWTEREDEILEDYVRKNGEGNWNTVQKNTGLRRDDKSCRYRWTH 80 5*****************************************75 PP
2	Myb_DNA-binding	47.3	4.7e-15	103	150	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r++WT+ Ede+l+d+vk++G g Wk++ + g++R++ +c +rw+ +l evm.model.AsparagusV1_06.164 103 RLPWTPREDEILKDYVKKYGEGKWKAVEKNTGLRRSGRSCENRWRVHL 150 89*******************************************986 PP
3	Myb_DNA-binding	25.9	2.4e-08	156	199	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g +T eE + ++ lG+ W++Ia+ ++ gR++ +++s+w++ evm.model.AsparagusV1_06.164 156 KGLFTDEELRTIMRLRDTLGNS-WSAIAEQLP-GRSAIEIQSYWNS 199 5779**************99.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1856 aa Download sequence
MAGKDMAGDN DDGDRKLPEE LSSQKGDSKE EPSSRRLWTE REDEILEDYV RKNGEGNWNT 60 VQKNTGLRRD DKSCRYRWTH HVRHNLKKGP IITDGSNDGY KSRLPWTPRE DEILKDYVKK 120 YGEGKWKAVE KNTGLRRSGR SCENRWRVHL RPDRKKGLFT DEELRTIMRL RDTLGNSWSA 180 IAEQLPGRSA IEIQSYWNSI EGVYRITDSE RLQSSTSNVN YNIDFNALRE EFINPDRQLQ 240 HLKNLNPNPT QSINSTNFSY LEPQAQHQYG IDNSNAVIPI QENTSPLLAG GSDDLDRAPI 300 PAHAYSSWQP ESPEQRNRTP NDYVNRTGVQ SYDDGLLCEN ARDVHFTGST GFPYTSPVAQ 360 ARPQYDMYNS NQQLAGSSEI FSSPIQEDRS SFINPLSARE YDPQAQAYSF TQPENMLHNR 420 TMYDSIDDLL HENPSSTGCS YTSPVAQAQP QYDMYNSNQQ LAGSSEIFRS PIQEDRSSFI 480 NPLSAREFDP RAQAYSFTQP ENMLHNRTMY DSLDDLLHEN PSSTGFSYTS PVAQAQPQND 540 MYNNNQQLVG STEILRRPIQ EDSSFRNLLP AQGCDESARA PAHAYSSLQQ EFVEQGNRMS 600 NEYANESRIP SYDDGLLCGN ALDVDYTGSP GLTYTYPLTH GQQQYGVHHN NEQLHASEYD 660 AHAHASEYDA RVSEIGHHSM MLNNNVDGLL PENPQGAGFT DSTVAHPMEA QVSTSAQINP 720 NQEHDQSAQF DQRGLQMAAP RNYSVAIDVE REEDEGGPVG ETFMDYRPPK LSLGHPHPDP 780 VVETSSLSAV QPPEPTYNLK IMDELENSKA LSCLQIETLV YACQRHLQHL ENGARAGFFI 840 GDGAGVGKGR TIAGLIWENW HYRRRKSLWI SVGSDLKFDA RRDLDDVGAT CVEVHALNKL 900 PYSKLDSRAV GIKEGVVFLT YSSLIASSEK GRSRLQQLVQ WCGSEFDGLV VFDECHKAKN 960 LIPEAGSQPT RTGEAVLDLQ ARLPEARVVY CSATGASEPR NMGYMARLGL WGSGTCFPKF 1020 HDFLGALDKG GVGALELVAM DMKARGMYVC RTLSYKGAEF EVIEAPLEEN MMEMYKKAAE 1080 FWAELRVELL SASAFLSEEK PTSSQLWRLY WASHQRFFRH MCMSAKVPAA VRLAKQALVD 1140 NKCVVIGLQS TGEARTEEAV TKYGAELDDF VSGPRELLLK LVEENYPLPQ KPDIVQGEES 1200 VRELQRKRHS ATPGVSFKGR VRKVAKWKAS SDSESDAEAE SDSDHESAES DEEFQMCEIC 1260 NSEEEKKLLL RCSCCGQQVH PACLMPPWTD AIPADWSCYS CKMKTDEYLQ ARDAYVAELL 1320 KRYEAANERK LKIMDIIRSL DLPNNPLDDI IDQLGGPEKV AEMTGRRGML IRASGGKGVV 1380 YQARNTKDVA MEMVNMHEKQ LFMDGKKSVA IISEAGSAGV SLQADRRALN QKRRVHLTLE 1440 LPWSADRAIQ QFGRTHRSNQ ASAPEYRLLF TNLGGERRFA SIVAKRLESL GALTQGDRRA 1500 GPSLSAYNYD SHYGKKALMM MYRGIMELDP LPVVPPGCSS ENPSTIQEFI IKAKAALVSV 1560 GIVRDSVLSN GKESGKLSGR IVDSDMHDVG RFLNRILGLP PDIQNRLFEL FISILDLIVH 1620 KARSEGQFDS GIVDIKANII ELQGPPKTVH VDSLSGASTV LFSFTVDRGI TWEFAKNLLD 1680 EREKDGLSCT ADGFYESKRE WMGRRHFMLA YEGSDIGLFK VVRPAIGEVL REMPLTELKS 1740 KYRKVSSIEK ANKGWLDEYE SSSKQCMHGP KCKVGSYCTV GRRLQEVNVL GGLTLPVWGT 1800 IEKALSKQAR QSHKRVRVVR LETTNDNQRI VGLLIPNAAV ESVLQDLSWV HDIDD*

Sequence ? help Back to Top

Protein Sequence Length: 1856 aa Download sequence

MAGKDMAGDN DDGDRKLPEE LSSQKGDSKE EPSSRRLWTE REDEILEDYV RKNGEGNWNT  60
VQKNTGLRRD DKSCRYRWTH HVRHNLKKGP IITDGSNDGY KSRLPWTPRE DEILKDYVKK  120
YGEGKWKAVE KNTGLRRSGR SCENRWRVHL RPDRKKGLFT DEELRTIMRL RDTLGNSWSA  180
IAEQLPGRSA IEIQSYWNSI EGVYRITDSE RLQSSTSNVN YNIDFNALRE EFINPDRQLQ  240
HLKNLNPNPT QSINSTNFSY LEPQAQHQYG IDNSNAVIPI QENTSPLLAG GSDDLDRAPI  300
PAHAYSSWQP ESPEQRNRTP NDYVNRTGVQ SYDDGLLCEN ARDVHFTGST GFPYTSPVAQ  360
ARPQYDMYNS NQQLAGSSEI FSSPIQEDRS SFINPLSARE YDPQAQAYSF TQPENMLHNR  420
TMYDSIDDLL HENPSSTGCS YTSPVAQAQP QYDMYNSNQQ LAGSSEIFRS PIQEDRSSFI  480
NPLSAREFDP RAQAYSFTQP ENMLHNRTMY DSLDDLLHEN PSSTGFSYTS PVAQAQPQND  540
MYNNNQQLVG STEILRRPIQ EDSSFRNLLP AQGCDESARA PAHAYSSLQQ EFVEQGNRMS  600
NEYANESRIP SYDDGLLCGN ALDVDYTGSP GLTYTYPLTH GQQQYGVHHN NEQLHASEYD  660
AHAHASEYDA RVSEIGHHSM MLNNNVDGLL PENPQGAGFT DSTVAHPMEA QVSTSAQINP  720
NQEHDQSAQF DQRGLQMAAP RNYSVAIDVE REEDEGGPVG ETFMDYRPPK LSLGHPHPDP  780
VVETSSLSAV QPPEPTYNLK IMDELENSKA LSCLQIETLV YACQRHLQHL ENGARAGFFI  840
GDGAGVGKGR TIAGLIWENW HYRRRKSLWI SVGSDLKFDA RRDLDDVGAT CVEVHALNKL  900
PYSKLDSRAV GIKEGVVFLT YSSLIASSEK GRSRLQQLVQ WCGSEFDGLV VFDECHKAKN  960
LIPEAGSQPT RTGEAVLDLQ ARLPEARVVY CSATGASEPR NMGYMARLGL WGSGTCFPKF  1020
HDFLGALDKG GVGALELVAM DMKARGMYVC RTLSYKGAEF EVIEAPLEEN MMEMYKKAAE  1080
FWAELRVELL SASAFLSEEK PTSSQLWRLY WASHQRFFRH MCMSAKVPAA VRLAKQALVD  1140
NKCVVIGLQS TGEARTEEAV TKYGAELDDF VSGPRELLLK LVEENYPLPQ KPDIVQGEES  1200
VRELQRKRHS ATPGVSFKGR VRKVAKWKAS SDSESDAEAE SDSDHESAES DEEFQMCEIC  1260
NSEEEKKLLL RCSCCGQQVH PACLMPPWTD AIPADWSCYS CKMKTDEYLQ ARDAYVAELL  1320
KRYEAANERK LKIMDIIRSL DLPNNPLDDI IDQLGGPEKV AEMTGRRGML IRASGGKGVV  1380
YQARNTKDVA MEMVNMHEKQ LFMDGKKSVA IISEAGSAGV SLQADRRALN QKRRVHLTLE  1440
LPWSADRAIQ QFGRTHRSNQ ASAPEYRLLF TNLGGERRFA SIVAKRLESL GALTQGDRRA  1500
GPSLSAYNYD SHYGKKALMM MYRGIMELDP LPVVPPGCSS ENPSTIQEFI IKAKAALVSV  1560
GIVRDSVLSN GKESGKLSGR IVDSDMHDVG RFLNRILGLP PDIQNRLFEL FISILDLIVH  1620
KARSEGQFDS GIVDIKANII ELQGPPKTVH VDSLSGASTV LFSFTVDRGI TWEFAKNLLD  1680
EREKDGLSCT ADGFYESKRE WMGRRHFMLA YEGSDIGLFK VVRPAIGEVL REMPLTELKS  1740
KYRKVSSIEK ANKGWLDEYE SSSKQCMHGP KCKVGSYCTV GRRLQEVNVL GGLTLPVWGT  1800
IEKALSKQAR QSHKRVRVVR LETTNDNQRI VGLLIPNAAV ESVLQDLSWV HDIDD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G55020.1	3e-30	MYB family protein