PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1590
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 647aa    MW: 70084.7 Da    PI: 5.641
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1590genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.18.1e-28209262155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    kpr++W+ eLH++Fv+av+qL G+ekA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  evm.model.AsparagusV1_06.1590 209 KPRVVWSVELHQQFVSAVSQL-GIEKAVPKRILELMNVPGLTRENVASHLQKFRL 262
                                    79*******************.********************************8 PP
2Myb_DNA-binding391.9e-12211261148
                                    TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r  W+ e+++++v av qlG +   +k+I + m+  g+t++++ s++qk++
  evm.model.AsparagusV1_06.1590 211 RVVWSVELHQQFVSAVSQLGIEkaVPKRILELMNvPGLTRENVASHLQKFR 261
                                    678**********************************************97 PP
3Response_reg79.79.9e-27241321109
                                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE CS
                   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt 78 
                                    vl+vdD+ + +++l q+l++ +y +v+++ +++ al ll+e++  +D+++ D+ mp+mdG++ll+     e++lp+i+++
  evm.model.AsparagusV1_06.1590  24 VLVVDDDVTCLKILDQMLQRCRY-RVTTCCQATVALSLLRERRggFDVVISDVHMPDMDGFNLLELVGL-EMDLPVIMMS 101
                                    89*********************.******************99********************87754.558******* PP

                                    STTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                   Response_reg  79 ahgeeedalealkaGakdflsKpfdpeelvk 109
                                    a g  e++ + +k Ga d+l Kp+ +eel +
  evm.model.AsparagusV1_06.1590 102 ADGGTETVMRGIKHGACDYLIKPVRIEELKN 132
                                    ****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    
MTMMSSSSSL GSSGGEKFPV GMRVLVVDDD VTCLKILDQM LQRCRYRVTT CCQATVALSL  60
LRERRGGFDV VISDVHMPDM DGFNLLELVG LEMDLPVIMM SADGGTETVM RGIKHGACDY  120
LIKPVRIEEL KNIWQHVIRK KKWNESRELE YSGGDDSDPN RRVSEDTECA SSVNDGADGI  180
SMSHKKKRED KEDEDDGELD HEDPSSSKKP RVVWSVELHQ QFVSAVSQLG IEKAVPKRIL  240
ELMNVPGLTR ENVASHLQKF RLYLKRISGV AQQQNGIPSS LCGPVEPDAK VGSGGRLDFQ  300
ALAASGQIHP ETLAALHAEL LGRPSGSLVF PAMDQPVLQS SRQGPQCIPS ERDVQFGQPL  360
FKCQSRITKQ FPTSGIGENM SADFSIWPSN YLGTADAIKN VGGVNNTPKV NMMMQVLQQQ  420
QQPYPVVSEP HHIINVQPSC LVVPSRPSNS LSVSQGSLLL NQSSIGVQSE SSNKFQSENS  480
SGTVKSSSNI NGVPEYRLPS LSNKASLHLE QSVVGDTTNI GVLNGSSVSF SSSLSSYSTS  540
TNSGTGSERK AGKSFDQAQA RNLGFVGKGT CIPSRFAVDD IESPTSEQCV RNTSTGDDGA  600
RVKQELQLDF TDSSQVGGST MLPHFSSNNF MSVLSEDGLQ GHFTEC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-110ARR-B family protein