PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.613

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 311aa MW: 34572.7 Da PI: 6.162

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.613	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.6e-09	179	231	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +r+a n+ ++ R +ri +++ Lr+ +P s K + a++L +++YIk+L+ evm.model.AsparagusV1_05.613 179 QREARNQKDKLRKARISQGIRVLRSNVPCfG---FSDKGDEASVLDDTIDYIKYLK 231 799************************55...******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MFQSCNEKTF CLSSLCICIL FISMRGANGV SVPRISTMLG KGKTIVEPKQ EQQIDASLNV 60 CMEKENYPIA QNGFFRQTHH RHELDLIAEE LLNPTPLCVI PCNESYFPSH FVEQKKSISS 120 PRVASDADIL AIGYSALNTD GEPADASVNG QQILPCLRQI PDRALCAIAE PYSPVIFSQR 180 EARNQKDKLR KARISQGIRV LRSNVPCFGF SDKGDEASVL DDTIDYIKYL KLQLKLLSQS 240 RLSGESTAYP FVHLEGYGHY LLHQGVRSDP LEDIIGDLLE MRPQAANELL QSKGLTLLPM 300 DFAYTLLCTT *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30980.1	2e-08	bHLH family protein