PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.3313
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 304aa    MW: 33929.4 Da    PI: 7.2831
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.3313genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000325265114
                                   EEETTTTEEESSHH CS
                        zf-C2H2  1 ykCpdCgksFsrks 14
                                   +kC++C+ksFs+k+
  evm.model.AsparagusV1_05.3313 52 FKCQKCDKSFSSKD 65
                                   89*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MRQYSFGDHW EARVPHNDST ELDFFSCPIC YEPLIRKGPP GLNLASIYRS GFKCQKCDKS  60
FSSKDVYLDL TVTAGTTEYN ELKPARTELF RSPLVSFLYE RGWRQNFNRS GFPGRDEEFE  120
MAQDYFKPVA GGFLVDVSCG SGLFSRKFAA SGSYSAVVAL DFSENMLRQC YEFIKQDDML  180
LTTNLALVRA DVSRLPFASG SIDAVHAGAA LHCWPSPSNA VAEVSRILRS GGVFVATTFL  240
SSPLNTPFPS ESSRPLRQFF GQVTNSYAYF TEKEIEDLCK SCGLINYTSK VQRAFIMFSA  300
QKP*