PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.330
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 433aa    MW: 49403.8 Da    PI: 9.9266
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.330genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS391.97.2e-120574281374
                          GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal 81 
                                   l++lL++cA+av+++d + a++lL+++++ +sp gd  qRla++f+ +L+arla+++s++y++l +++t+    ++ l+a+
  evm.model.AsparagusV1_05.330  57 LRTLLIHCAQAVAADDRRSANELLKQIRQYSSPFGDGSQRLAHCFADGLEARLAGTGSQIYHSLVAKRTT---ATDILKAY 134
                                   6789************************************************************999999...9******* PP

                          GRAS  82 klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeelee 160
                                   +l+  ++P+ ++sh+  Nq I +  e+++rvHiiDf+i  G+QWp+L+q L+sRp+gpp+l+iTg++ p++g   +e++ee
  evm.model.AsparagusV1_05.330 135 QLYLAACPFKRISHFFSNQIIHNVSENASRVHIIDFGIYFGFQWPCLIQRLSSRPGGPPKLKITGIDVPQPGfrPTERIEE 215
                                   ***********************************************************************9********* PP

                          GRAS 161 tgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvv 241
                                   tg+rLa++A++++vpfe+n+ +a+++e++++++L+++++E+l+Vn+ ++  +l+de+v ++s+r+ vL+++++ +P+v+++
  evm.model.AsparagusV1_05.330 216 TGKRLADYARTFNVPFEYNA-IASKWETIRVDDLKIDKDEVLIVNCLYRFRNLVDETVVVDSPRNMVLDTIRKANPHVFIH 295
                                   ********************.7*********************************************************** PP

                          GRAS 242 veqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleea 322
                                      + +++++ F++rf eal ++salfd+le+++pre+ +r  +Er l+gre+ nv++ceg+er+er et+++W+ r  +a
  evm.model.AsparagusV1_05.330 296 GIVNGSYSAPFFVTRFREALFHFSALFDMLETNVPREDAQRLLIERDLFGREALNVISCEGSERVERPETYKQWQVRNLRA 376
                                   ********************************************************************************* PP

                          GRAS 323 GFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                   GF+++pl+ +++k+a+  ++ ++ + + ++e+s +l++gWk+r ++++SaW+
  evm.model.AsparagusV1_05.330 377 GFTQLPLNMEIMKKARDKVKGMYHKDFVIDEDSRWLLQGWKGRIIYAISAWK 428
                                   ***********************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MFDMVLLCQK GKNCTNGVSA LQEALRNEVS KNSKNNSPKG SAKSRAKKQS KKEVVDLRTL  60
LIHCAQAVAA DDRRSANELL KQIRQYSSPF GDGSQRLAHC FADGLEARLA GTGSQIYHSL  120
VAKRTTATDI LKAYQLYLAA CPFKRISHFF SNQIIHNVSE NASRVHIIDF GIYFGFQWPC  180
LIQRLSSRPG GPPKLKITGI DVPQPGFRPT ERIEETGKRL ADYARTFNVP FEYNAIASKW  240
ETIRVDDLKI DKDEVLIVNC LYRFRNLVDE TVVVDSPRNM VLDTIRKANP HVFIHGIVNG  300
SYSAPFFVTR FREALFHFSA LFDMLETNVP REDAQRLLIE RDLFGREALN VISCEGSERV  360
ERPETYKQWQ VRNLRAGFTQ LPLNMEIMKK ARDKVKGMYH KDFVIDEDSR WLLQGWKGRI  420
IYAISAWKPN RV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein