 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | evm.model.AsparagusV1_05.3115 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
| Family | bZIP | ||||||||
| Protein Properties | Length: 293aa MW: 33564.3 Da PI: 8.3031 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 20.4 | 1.1e-06 | 135 | 173 | 11 | 49 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 11 qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
++NRe+A sR+RKk++++eLe k+k Le+e ++L + l
evm.model.AsparagusV1_05.3115 135 MRNRESAMQSRERKKMYVKELEMKSKYLESECRRLDNAL 173
8******************************99997655 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 293 aa Download sequence |
MEGAAAEFDY QNPIFNDDDI DLDAILQGIP QDFTLDLDLD QWLSNFPKEP ENPPSVEEME 60 KFLMDDGDKE KARVEYGDNV VEEFFSGILV DGSGSGSDGG RSEMATPESX XXXRAPRRRR 120 RRRRRTRGRM RSWQMRNRES AMQSRERKKM YVKELEMKSK YLESECRRLD NALRCCMAEN 180 FSLHQLLQKD CASAAKQESA VLFMESLLLG SLFWLLSTMF LFLGLSVRRL NSNGPSRLGR 240 DLALEAVVSK AVPNEKSRPD FGDGLVIMRR RYKGSRTRMK SFLLLPMQAL ST* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 114 | 123 | RAPRRRRRRR |
| 2 | 117 | 126 | RAPRRRRRRR |
| 3 | 117 | 122 | RRRRRR |
| 4 | 117 | 123 | RRRRRRR |
| 5 | 117 | 124 | RRRRRRRR |
| 6 | 117 | 125 | RRRRRRRRR |
| 7 | 117 | 127 | RRRRRRRRRTR |
| 8 | 118 | 123 | RRRRRR |
| 9 | 118 | 124 | RRRRRRR |
| 10 | 118 | 125 | RRRRRRRR |
| 11 | 118 | 126 | RRRRRRRRR |
| 12 | 119 | 124 | RRRRRR |
| 13 | 119 | 125 | RRRRRRR |
| 14 | 119 | 126 | RRRRRRRR |
| 15 | 119 | 127 | RRRRRRRRR |
| 16 | 119 | 129 | RRRRRRRRRTR |
| 17 | 119 | 126 | RRRRRRRT |
| 18 | 120 | 125 | RRRRRR |
| 19 | 120 | 127 | RRRRRRRR |
| 20 | 120 | 128 | RRRRRRRRR |
| 21 | 120 | 127 | RRRRRRRT |
| 22 | 121 | 131 | RRRRRRRRRTR |
| 23 | 121 | 128 | RRRRRRRT |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G42990.1 | 6e-12 | bZIP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|