PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_05.2294 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 140aa MW: 15563.6 Da PI: 10.2569 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.3 | 1.2e-15 | 12 | 61 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr++ +grWvAeI++ s ++ r +lg+f +eeAa a++ a++ l+g evm.model.AsparagusV1_05.2294 12 KFLGVRQRT-SGRWVAEIKVSS---QKLRLWLGTFNRPEEAAMAYDLAARILRG 61 789***999.7*********42...36***********************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 140 aa Download sequence |
MDIGKSNNKK KKFLGVRQRT SGRWVAEIKV SSQKLRLWLG TFNRPEEAAM AYDLAARILR 60 GNNAKTNFAS MGESNNYQVS LRNSRLHQLM QHEELSSCVH ETLVCSDHGK KREEVSGVSS 120 GGSRVYSSVV VVPSFEFEG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-26 | ERF family protein |