PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2213
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Dof
Protein Properties Length: 310aa    MW: 32903.2 Da    PI: 8.7346
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2213genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof53.74.5e-17132190361
                         zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGgg.rrknkks 61 
                                    ++ +kcprC+stntkfCyynny+lsqP                lrnvPvG g +rkn ++
  evm.model.AsparagusV1_05.2213 132 QTPIKCPRCESTNTKFCYYNNYNLSQPAISASPAAAT-GPKALLRNVPVGCGsCRKNSSK 190
                                    6789***********************9766555433.334579******7627887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MIGTKNGRGA ATWRDVDHVN RSRWRGGGAE NSGWAVRVSP SDGERSPTGR TAETDICPPL  60
CTRARELCPS PPSSRRSSSS ENEDATKGEG EKRSERKPRL DARVPTGPEL AGRVFPRPDT  120
AARGEPPSTP HQTPIKCPRC ESTNTKFCYY NNYNLSQPAI SASPAAATGP KALLRNVPVG  180
CGSCRKNSSK RSAKSSKPDK NPRPKPVTAP SGSSSESSSN PNPKPNPDPV PPPSAATVFD  240
GLGFDFSDPG VLTGYRVADP EPVDPNQGKG LEWGNGSVDS GSLFDITSSV DTYWNQANWG  300
DTDPSLYLP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.13e-13Dof family protein