PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2129
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 305aa    MW: 33634.2 Da    PI: 8.7825
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2129genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.13.4e-066283223
                                   EETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                                   +Cp C+k F+++  L  H+r+H
  evm.model.AsparagusV1_05.2129 62 TCPECPKIFPTPKALYGHLRSH 83
                                   7********************9 PP
2zf-C2H214.88.4e-05179201123
                                    EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                    y+C++C+++F ++  L  H  +H
  evm.model.AsparagusV1_05.2129 179 YQCNICDRTFASHQALGGHRASH 201
                                    9***************9999888 PP
3zf-C2H214.10.00014229251123
                                    EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                    +kC+ C+++F +   L  H+r+H
  evm.model.AsparagusV1_05.2129 229 HKCKVCSEVFATGQALGGHMRRH 251
                                    79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MRAMQQKEAS NKKADSEVNG SVSKMHEKDY NEETSSDVTE SNSGKSQQAI ESSETNNLNM  60
ITCPECPKIF PTPKALYGHL RSHPERAYRG ANKPVKNLKR RSNQTSTVTN WRRSNPTSTV  120
TNWQQSNPTS TVTNWGLRAK RGRTTPEEFA AQTLLIISET VVIVPVKRPE ESPKGSKTYQ  180
CNICDRTFAS HQALGGHRAS HNKKTEPHEG VTENGVVQAD ARAATAIEHK CKVCSEVFAT  240
GQALGGHMRR HYNGPPLTGN ALENVGNANE NENVENVERG NRGSRLFDLN EYPPQFEEVY  300
GAAV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.11e-27C2H2 family protein