PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2048
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 323aa    MW: 35625.8 Da    PI: 6.0651
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2048genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.5e-07248288954
                                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                     r RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  evm.model.AsparagusV1_05.2048 248 ARHRRERISERLRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 288
                                    599*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDNLGWDVVS PSSIFRNNEL LTVPPNNTIW NNSNQYESDA DYCIISNKAE LNDSILLNSS  60
LDQLQQLDSI NIELLAPAFD MAMSNNHLDL DSLLTSSNHQ LVPFPEQIFT SGSSGNLTSS  120
AESESSSQAA ESSKNLRSCK RKFENHQQHS TTGGGAFQIF FEKNSASSKR SRLLNEKDSM  180
DKISNIDFRQ ENAKSSGYEP DTEAIAQVKE MIYRAAAMRP VNLVLEEATE KPKRKNVKIS  240
SDPQTVAARH RRERISERLR VLQKLVPGGS KMDTASMLDE AANYLKFLKS QVSALETLRG  300
GGGGGISNNI NVQAFAMQYP KP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.19e-49bHLH family protein