PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.20

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bZIP

Protein Properties

Length: 299aa MW: 32416.2 Da PI: 6.9549

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.20	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.9	1.6e-16	187	244	3	60
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 + kr rr+ +NRe+ArrsR+RK+a + eLe v +L eN+aL k+l +++++ + evm.model.AsparagusV1_05.20 187 DAKRVRRMLSNRESARRSRRRKQAHLSELEAQVSQLRVENSALLKRLTDINQKYNEAS 244 689********************************************99999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MMNRSPSEWF FQKFLEEEAV RSNLNPNPSP NPNIACASSA VSSNLSSSRR DGGDDEVVEI 60 KKPLIAAVGS VPSSSDPTAD VDPGEYAAML KQKLDMYCHA VAIARGTGIT PQDSSLADSK 120 SPASDSSQLE PQALVNGGGS NGVSALPIVQ NSGTQGRPAT SGSSREQTDD EDLEGETEMT 180 DNMDPADAKR VRRMLSNRES ARRSRRRKQA HLSELEAQVS QLRVENSALL KRLTDINQKY 240 NEASVDNRIL KADVETLRAK ILTRHPYKPL TSRIVSPLLS SRFFVVVVRL ISGHPPFS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	209	RRSRRRKQ
2	204	209	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.3	5e-45	bZIP family protein