PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.1857
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 316aa    MW: 36034.4 Da    PI: 9.1727
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.1857genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.59.8e-1419555591
                            NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
                                   +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk 
  evm.model.AsparagusV1_05.1857 19 QNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKV 55
                                   579*******************************874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDLRFSSETD KCKIGSTLQN DWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKVHSILR  60
PEKHPLAQCQ SCISILTVGL RFRVLSIWIH LLVLGFSKDE TDYTTGDLKT AKDTHTFLLK  120
WFELYPEFLE NPFYISGESY AGIYIPMLAA EVANGIIACV KPALKFKGYM IGNGCTDEQF  180
DGDALVPFAH GMGLISNDLF QEVKSACQGS YWNPVNKTCE EKLNKVDQKL KDLTIYDVLE  240
PCYHHPEIRY PSADDIRLPS SFRRLGETDR PLHVRRRMFG RSWPLRATVR AGRVPTWTEL  300
GRRKPLCTVH SKLRA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.15e-14NAC family protein