PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.1068 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | SBP | ||||||||
Protein Properties | Length: 194aa MW: 20552.6 Da PI: 8.8679 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 72.6 | 6.9e-23 | 85 | 133 | 1 | 49 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 +CqvegC +dl+ ak y+ rhkvC +hsk+p+v+v+g+eqrfCqqCsr evm.model.AsparagusV1_05.1068 85 RCQVEGCLVDLTGAKAYYCRHKVCGMHSKSPKVVVAGIEQRFCQQCSRL 133 6**********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MEMGSGSSGA SDSLNGLKFG KKIYFEDVGN GGNTSGSSSK GLNVSMAAPA PAHPPPPPPP 60 SQKKGKGVSS AGQQQSNQQQ QQPPRCQVEG CLVDLTGAKA YYCRHKVCGM HSKSPKVVVA 120 GIEQRFCQQC SRLGSSPLPT IIIIIIMFLG GFPNLFSFHF HFISDYLVLD YGLGLFGDGF 180 ASLFLSWVKL YCG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 2e-24 | SBP family protein |