PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.855
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 337aa    MW: 37424.4 Da    PI: 4.9479
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.855genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-171562148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  +g+WT+eEd+llvd+++ +G g+W+  ++  g+ R++k+c++rw +yl
  evm.model.AsparagusV1_04.855 15 KGPWTPEEDKLLVDYIQAHGHGSWRFLPKLAGLQRCGKSCRLRWINYL 62
                                  79********************************************97 PP
2Myb_DNA-binding51.42.4e-1668113148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                   rg++T+eE++ +++++   G++ W+tIa+ ++ gRt++++k++w+++l
  evm.model.AsparagusV1_04.855  68 RGPFTQEEQKSIIQLHGIVGNK-WSTIAAQLP-GRTDNEVKNYWNTHL 113
                                   89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MGRSPCCDKQ LGLKKGPWTP EEDKLLVDYI QAHGHGSWRF LPKLAGLQRC GKSCRLRWIN  60
YLRPDIKRGP FTQEEQKSII QLHGIVGNKW STIAAQLPGR TDNEVKNYWN THLKKQLLRM  120
GINPTLTYAP PSTSPLSPSP PNYTTSASSS STTSSSFSAA RHMAQWETAR LEAEARLRLF  180
SSPSSSAATS AATLIPTGNA DNAQDVDKEP VDVFLRMWNS DVGKSFRNQN PVILALTNGE  240
ESGEAEASPS SCNTKQSSAL TVSDVDEMAK EERVKEEEER DEREEAESRR EDETFQFYLD  300
LAGGDDDLGF FQTNHQSCYS FFGSELSEVS LDNDPF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.18e-81MYB family protein