PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.714
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 485aa    MW: 54370.7 Da    PI: 4.6304
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.714genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.9e-091864347
                                  SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                                   W+  E +++v+a + +G +    Wk Ia+t++ g+++ ++ +++ ++
  evm.model.AsparagusV1_04.714 18 TWSRSENKKFVNALAIYGIEnpeIWKIIAATLP-GKSPRDIEEHYETL 64
                                  5******************9*************.***********875 PP
2Myb_DNA-binding27.38.2e-09416460347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                   +WT+eE+  ++ +      g+WktI+r     +t+ q+ s+ qky
  evm.model.AsparagusV1_04.714 416 SWTEEEHRNFLMGLDHERRGDWKTISRLYIPSKTPAQISSHAQKY 460
                                   7**************************9888*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MERNKNFSNW RPPRPPATWS RSENKKFVNA LAIYGIENPE IWKIIAATLP GKSPRDIEEH  60
YETLVHDITR IEMGRIKLPE YKNDFEGDCD HDGDGLIDET AGGLRETADV HENGILDVGI  120
SDVHETAETL RDIPSYNQVS DVHENGILEV GANVVRENDI PDVRASDLHK KGMSEVGVSD  180
IDENVFLEVG VSDVHENRFL EVSDVHENGF LEFSNLHENR FLEVGVSDVH ENGSLQVMLT  240
DDVHNNGFLE ARTADDVHNN GFLEARASND VHENGFLDVG VSDVHENESL QVMLTDDVHN  300
SGFVEARASD DVHENDFLKV GVSDVHENGS LQVMLTDDVH NNGFLEARAS DDVHGNGFLE  360
VIASNGHEND FLEVSDVHCN RSLEIGVSDV LGVEVSHVHE KGNPELGARL RKRGRSWTEE  420
EHRNFLMGLD HERRGDWKTI SRLYIPSKTP AQISSHAQKY FKRQKVVESG NARRKSIHDI  480
TKME*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1410416LRKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.13e-21MYB family protein