PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.624

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

GRF

Protein Properties

Length: 303aa MW: 33650.4 Da PI: 9.1326

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.624	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.6	6.8e-26	101	145	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ evm.model.AsparagusV1_04.624 101 DPEPWRCRRTDGKKWRCSREVVAGQKYCERHVHRGRNRSRKHVEA 145 79****************************************996 PP
2	QLQ	47.1	7.4e-17	35	71	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s F+ aQ+q+L+ Q+l+yKy++a++ vP +L++++++ evm.model.AsparagusV1_04.624 35 SLFSLAQWQELELQALIYKYMLAGASVPLDLILPLKR 71 68*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MDHSQWRNQQ QPPAEDQTLH SPEPNTKWTT CRMGSLFSLA QWQELELQAL IYKYMLAGAS 60 VPLDLILPLK RSLVSSSPYY HYQHFQPSML QTGYWGRSLV DPEPWRCRRT DGKKWRCSRE 120 VVAGQKYCER HVHRGRNRSR KHVEAPTSKG GGGFKAATLS VLEEKKQAHF TLSGPSPTRR 180 PPDSKSTDGR VLMRFFDDWP RSEQDHNNNE SSVASDTHLS ISVPESSSSD FSLKLSTGNT 240 DSLGLNSEKP LLANWSGWDN NGEASMGGPL AEALRSSTST TSPTSVLRKL NGSVSEASSA 300 ST*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-48	GRF family protein