PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.354

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 374aa MW: 42565.5 Da PI: 4.2553

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.354	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	137.3	9.6e-43	40	173	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkya.tgkrknratk 79 +pGfrFhPtdeel+ +yL++k++++++++ +vi+e++iy++ePwdLp +++++++ ewyfF++ d+k+ t +r+nra evm.model.AsparagusV1_04.354 40 APGFRFHPTDEELLLYYLRNKITRRPFPF-DVIAELNIYSFEPWDLPsfSRLRTRDIEWYFFTPLDRKQCsTLTRTNRASP 119 69*************************.99***********5337777888***9998763789*** PP NAM 80 sgyWkatgkdkevlsk...kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +g+Wk tg+dke+ ++ +g ++g kktLvf+ + ++++ ++tdWvmhey+l evm.model.AsparagusV1_04.354 120 RGFWKITGRDKEIRRSgngGGFVIGFKKTLVFHlgRTSSKEQTRTDWVMHEYKL 173 **********987666667******54446677789******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MLEEMALSFP TTNPNPNPNP NPNPNQTSSS SAPPPLPLIA PGFRFHPTDE ELLLYYLRNK 60 ITRRPFPFDV IAELNIYSFE PWDLPSFSRL RTRDIEWYFF TPLDRKQCST LTRTNRASPR 120 GFWKITGRDK EIRRSGNGGG FVIGFKKTLV FHLGRTSSKE QTRTDWVMHE YKLAHEELAR 180 IGVNWDGFVV CRVFQKSGLG AKNGEQYGAP YVEEEWEEAE ELAVVRTEEE GGGDGRNVEF 240 EFDVNWDWDT FLQTEDIDND KVFGYLFLDM PDIFNPPRNT SIEAPPADNT AAAPMESQPA 300 PLINQQTGPF VQFMDVESTG VVNFPHAEII NDQVPVIQMP AVVDDGRNCC LEPPDGEFFD 360 VIDFEYDTLN TFD*

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MLEEMALSFP TTNPNPNPNP NPNPNQTSSS SAPPPLPLIA PGFRFHPTDE ELLLYYLRNK  60
ITRRPFPFDV IAELNIYSFE PWDLPSFSRL RTRDIEWYFF TPLDRKQCST LTRTNRASPR  120
GFWKITGRDK EIRRSGNGGG FVIGFKKTLV FHLGRTSSKE QTRTDWVMHE YKLAHEELAR  180
IGVNWDGFVV CRVFQKSGLG AKNGEQYGAP YVEEEWEEAE ELAVVRTEEE GGGDGRNVEF  240
EFDVNWDWDT FLQTEDIDND KVFGYLFLDM PDIFNPPRNT SIEAPPADNT AAAPMESQPA  300
PLINQQTGPF VQFMDVESTG VVNFPHAEII NDQVPVIQMP AVVDDGRNCC LEPPDGEFFD  360
VIDFEYDTLN TFD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-65	NAC family protein