PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.3454
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 321aa    MW: 35487.4 Da    PI: 4.968
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.3454genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.74.7e-064873123
                                   EEET..TTTEEESSHHHHHHHHHH.T CS
                        zf-C2H2  1 ykCp..dCgksFsrksnLkrHirt.H 23
                                   y C+  +C ksF r+s+L+ Hi+  H
  evm.model.AsparagusV1_04.3454 48 YICGapHCLKSFLRRSDLEAHINEaH 73
                                   889999****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVSNARGIPT LEEVVSGVIT FLQGGGEEPS CDERIQKIQT IKLMEGIYIC GAPHCLKSFL  60
RRSDLEAHIN EAHADLIRPN IEKEEANDNN ALNTAKPSST DAQKQSQQPE VSTARAPPKP  120
SAFSPSANSQ DQDREERARR HQSRDPSPRP QLQPNPPQFQ NQQQTQTSDF PAENQPQNWF  180
PQPPTLPPFQ QNPDQFPMNY PLPYPVQFPT DGSQPLYNVP QDSNQGSVLG VQPSPSAIGG  240
FPNNLSQQWA MGFMSVPLQP LHMNNPQFLQ GEGMTINPQI QGKESDQQPP PPLPLTPPPA  300
LAHQQQQQIN RNRDFPPGFG *