PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.316
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 314aa    MW: 35412.4 Da    PI: 9.9026
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.316genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000264465122
                                  EEETTTTEEESSHHHHHHHHHH CS
                       zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
                                  y C++C+++F+++  L  H ++
  evm.model.AsparagusV1_04.316 44 YNCHHCSRTFNSSQALAGHCKR 65
                                  89*****************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MKRKRREAHD EEGYEKEDEA RPMANRSRNK KPAEEAAEND AKVYNCHHCS RTFNSSQALA  60
GHCKRKVVVG RCKSHPSTKD EIPPHVLRCL QQRQREVPEA PPPPTPGQHF FHDPNYSRRH  120
QYSQPTTSQS SYTNARKLAC VPSQAAVTFY EPLTHLTRPV ATPIPSYNHN PCYNQPMPSQ  180
SSNNVRNIAY APSQAITFYE PFTRATRVTN NPNPNPNPNP SSMNGAYIRR PITCPMNRVY  240
DRQPITSQSS TNVRNLAYAP SQAYGPLTLS TRVNTNPNPN LSSMIMRTYD HGSSSNGEKN  300
NKEELDLTLR LGR*