PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.2732

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

C2H2

Protein Properties

Length: 290aa MW: 31929.2 Da PI: 7.6376

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.2732	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0014	15	37	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F+++ L H +H evm.model.AsparagusV1_04.2732 15 FECKACKKVFTSHQALGGHRASH 37 89**************9999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MVHSAANYTL PKGMFECKAC KKVFTSHQAL GGHRASHKKV KGCFAAKLDD IDDPPIKDDT 60 AIGNEQNQDV LAMAIVPFNN VPLAVTPLKK KSKVHECSIC HRQFASGQAL GGHKRCHWIT 120 SNSGHDPNPM AKPHHHPQTH QEENNRIGTN HELTLRPMFD ASETLDLNLP ARHDIGSPLT 180 LDVPTALYLQ QPWVDQKKKG VATSGVKDKK EIDNENGGGC SVTNKTDDYI MEDEIDSKVK 240 LAKLSELKDM NVGEESPWLQ VGIGSSEKPR DCIFRPKKVV NKIDLSHEG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	6e-23	C2H2 family protein