PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.2708
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family BBR-BPC
Protein Properties Length: 364aa    MW: 40824 Da    PI: 9.8799
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.2708genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind369.18.4e-11323631301
                      GAGA_bind   1 mdddgsre.rnkg.yye........paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaer 70 
                                    mdd+  ++ r+k+ +y+        p++++k+ ++++lm+++aerd++i+ern+alsekkaa aerdma lqrd+a+aer
  evm.model.AsparagusV1_04.2708   2 MDDNQRENgRHKAdHYKsihtqwmmPQHQMKDSQAIKLMTVMAERDNAIQERNIALSEKKAAQAERDMAILQRDAAIAER 81 
                                    777766669****99999***9999778**************************************************** PP

                      GAGA_bind  71 nkalverdnkllalllvensla......salpvgvqvlsgtksidslqqlse.............pqledsave.lreee 130
                                    n+a++erdn+++al++++++ +      s +p+g+++++g k+++++++ ++             pql++++++  re++
  evm.model.AsparagusV1_04.2708  82 NAAIMERDNAIAALEYARENGMnanssiSGCPSGCSASRGMKHTHHHHHNHQqqqslhvhpgpspPQLANDPYNhSREMH 161
                                    **************9987665558888999************9999888555688999****************99**** PP

                      GAGA_bind 131 klealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskk.kvkkesader....................... 186
                                     +ea+pi++a e a  ++k+k+ ++ ++++++ + ++  +++ks+k k +  ++d +                       
  evm.model.AsparagusV1_04.2708 162 VTEAYPISTASEGAVMVRKVKRPRKDTRAQVQPQASALPRKTKSRKgKRSFGGEDLNkqatyvkpldewrnemggsgenl 241
                                    **********999998888888777777777766633322222222022222222224578999**************** PP

                      GAGA_bind 187 .......skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrK 259
                                            ++e+k++dl+ln+v++Dest+PvPvCsCtG+ + CYkWGnGGWqSaCCttt+S+yPLPv++++r+aR++grK
  evm.model.AsparagusV1_04.2708 242 nnkqgtkHHNEWKDQDLGLNQVTFDESTMPVPVCSCTGKYQPCYKWGNGGWQSACCTTTLSMYPLPVMPNKRHARVGGRK 321
                                    *****99999********************************************************************** PP

                      GAGA_bind 260 mSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                                    mS+ +f+klL++LaaeG+dls pvDLkdhWAkHGtn+++ti+
  evm.model.AsparagusV1_04.2708 322 MSGTVFTKLLSRLAAEGHDLSVPVDLKDHWAKHGTNRYITIK 363
                                    *****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MMDDNQRENG RHKADHYKSI HTQWMMPQHQ MKDSQAIKLM TVMAERDNAI QERNIALSEK  60
KAAQAERDMA ILQRDAAIAE RNAAIMERDN AIAALEYARE NGMNANSSIS GCPSGCSASR  120
GMKHTHHHHH NHQQQQSLHV HPGPSPPQLA NDPYNHSREM HVTEAYPIST ASEGAVMVRK  180
VKRPRKDTRA QVQPQASALP RKTKSRKGKR SFGGEDLNKQ ATYVKPLDEW RNEMGGSGEN  240
LNNKQGTKHH NEWKDQDLGL NQVTFDESTM PVPVCSCTGK YQPCYKWGNG GWQSACCTTT  300
LSMYPLPVMP NKRHARVGGR KMSGTVFTKL LSRLAAEGHD LSVPVDLKDH WAKHGTNRYI  360
TIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-115BBR-BPC family protein