PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1704

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 378aa MW: 42459.5 Da PI: 4.7936

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1704	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.9	4.6e-54	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknrat 78 lppGfrFhPtd+elv +yLk+kv+gk++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rdkky++g+r+nrat evm.model.AsparagusV1_04.1704 6 LPPGFRFHPTDDELVGYYLKRKVDGKPIEL-EVIPVIDLYKFDPWELPdKsFLPKRDMEWFFFCPRDKKYPNGSRTNRAT 84 79**************************.99**********96434556788****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +sgyWkatgkd++v++ ++++ gl+ktLvfy+grap ge+tdWvmheyrl evm.model.AsparagusV1_04.1704 85 SSGYWKATGKDRKVFC-ESSVQGLRKTLVFYRGRAPGGERTDWVMHEYRL 133 ************.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MGPMSLPPGF RFHPTDDELV GYYLKRKVDG KPIELEVIPV IDLYKFDPWE LPDKSFLPKR 60 DMEWFFFCPR DKKYPNGSRT NRATSSGYWK ATGKDRKVFC ESSVQGLRKT LVFYRGRAPG 120 GERTDWVMHE YRLCEDLSQP TPNFMGAFAL CRVVKRTEQG LKLGDSMVEA KGKRSFSSTT 180 NDFSPRKNSS KSSDRAEEPS SQAASLFEIC SDSPLITSSV NGRETELHPV VFGTDQTGFW 240 GSQYLSNAPM EYPLGQSLLT EPVHSTQFAN LVESCPTNSL SSVSSYASFT EDTFLVDEFN 300 HNGSSSSFPS NFYGMNAYCD EQNMGLPELG WEMSYINTPF NGIEAYNTTL SPLVCRQASD 360 IDEANLWLQE DSLVFAM*

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MGPMSLPPGF RFHPTDDELV GYYLKRKVDG KPIELEVIPV IDLYKFDPWE LPDKSFLPKR  60
DMEWFFFCPR DKKYPNGSRT NRATSSGYWK ATGKDRKVFC ESSVQGLRKT LVFYRGRAPG  120
GERTDWVMHE YRLCEDLSQP TPNFMGAFAL CRVVKRTEQG LKLGDSMVEA KGKRSFSSTT  180
NDFSPRKNSS KSSDRAEEPS SQAASLFEIC SDSPLITSSV NGRETELHPV VFGTDQTGFW  240
GSQYLSNAPM EYPLGQSLLT EPVHSTQFAN LVESCPTNSL SSVSSYASFT EDTFLVDEFN  300
HNGSSSSFPS NFYGMNAYCD EQNMGLPELG WEMSYINTPF NGIEAYNTTL SPLVCRQASD  360
IDEANLWLQE DSLVFAM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	8e-90	NAC family protein