PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1684 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | C2H2 | ||||||||
Protein Properties | Length: 184aa MW: 20246.5 Da PI: 4.5918 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.3 | 5.5e-05 | 57 | 79 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H evm.model.AsparagusV1_04.1684 57 YTCNFCRREFRSAQALGGHMNVH 79 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MAAELGLFSL TQLQNLAQQQ QQQQRRPANE EDDSWEVRAF AEDTSSSMGT TWPPRSYTCN 60 FCRREFRSAQ ALGGHMNVHR RDRARLRQPP QVPEPPPVMI PSGEFVANGG LCLFYPVPNS 120 SSTFLSVSAY EQAVNLPTSS MNLGESLLGK VGMVRDASEG RDASSNDDGG IVEELDLELR 180 LGW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 3e-32 | C2H2 family protein |