PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1294

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

E2F/DP

Protein Properties

Length: 892aa MW: 98670.8 Da PI: 8.2669

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1294	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.8	6.7e-27	78	160	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkek 64 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k evm.model.AsparagusV1_04.1294 78 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgnnigppdqqqyDEKNIRRRVYDALNVLMAMDIISK-DK 153 689******...*999***************************************************. PP E2F_TDP 65 neirwkg 71 +ei+w+g evm.model.AsparagusV1_04.1294 154 KEIQWRG 160 *****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 892 aa Download sequence
MTATRAPPTR RSSGRRGGLR RSPAASXXXX ATPASDSTFI RMNQLDIHGD DAGSSQAAAE 60 EGNKKKKRGT RAVAGDKSGR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFADPGNNIG 120 PPDQQQYDEK NIRRRVYDAL NVLMAMDIIS KDKKEIQWRG LPRTSLNDVE ELKAERVALK 180 SRIDKKAAYL QELEDQYIGL QNLVNRNEQL HGDNPPGGVA LPFILVQTRP HATIEVEISE 240 DMQLVHFDFN STPFELHDDS YVLRAMRLSE QEHNDGDHEP HSIICDSSST QGLFSPPRPL 300 IRPNSQGKKS RSVRRGAYER RAGVGADGDE PCESTGRARD AWSTGCGVAL DAATRGLRVG 360 LVEREDFSSG TSSRSTKLIH GGVRYLEKAV FNLDYGQLKL VFHALKERKQ VIENAPHLCQ 420 ALPCMTPCFE WFEVLYYWAG LKMYDLVAGR RMLHLSRYYS ADESIELFPT LARKGHDRSL 480 KGTVVYYDGQ MNDSRLNVGL ACTAALVGAA VLNHAEVISI IKDDAGDRII GARIRDKISG 540 KEFDTFARVV VNAAGPFCDA VRKMADKDAP PMISPSSGVH IVLPDYYSPE GMGLIVPKTK 600 DGRVVFMLPW LGRTIAGTTD SNTPITMLPE PHEDEIQFIL DAICDYLNVQ VRRGDVLSAW 660 SGIRPLAIDP SAKNTESISR DHVVCEDYPG LVTITGGKWT TYRSMAEDAV NAAVRSGKLK 720 PANGCVTNNL HIVGGNGWDP ASFTVLAQQY VRMKKSYGGK IIPGVMDSYI SKHLSHAYGT 780 MAERVATIAQ NENLGKRLAH GYPFLEAEVA YCARNEYCES AVDFVARRCR LAFLDTDAAG 840 RALPRIIEIL ASEHKWDKAR KKLEFQKAKQ FLETFKSSKN AQFHDGKHTG S*

Sequence ? help Back to Top

Protein Sequence Length: 892 aa Download sequence

MTATRAPPTR RSSGRRGGLR RSPAASXXXX ATPASDSTFI RMNQLDIHGD DAGSSQAAAE  60
EGNKKKKRGT RAVAGDKSGR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFADPGNNIG  120
PPDQQQYDEK NIRRRVYDAL NVLMAMDIIS KDKKEIQWRG LPRTSLNDVE ELKAERVALK  180
SRIDKKAAYL QELEDQYIGL QNLVNRNEQL HGDNPPGGVA LPFILVQTRP HATIEVEISE  240
DMQLVHFDFN STPFELHDDS YVLRAMRLSE QEHNDGDHEP HSIICDSSST QGLFSPPRPL  300
IRPNSQGKKS RSVRRGAYER RAGVGADGDE PCESTGRARD AWSTGCGVAL DAATRGLRVG  360
LVEREDFSSG TSSRSTKLIH GGVRYLEKAV FNLDYGQLKL VFHALKERKQ VIENAPHLCQ  420
ALPCMTPCFE WFEVLYYWAG LKMYDLVAGR RMLHLSRYYS ADESIELFPT LARKGHDRSL  480
KGTVVYYDGQ MNDSRLNVGL ACTAALVGAA VLNHAEVISI IKDDAGDRII GARIRDKISG  540
KEFDTFARVV VNAAGPFCDA VRKMADKDAP PMISPSSGVH IVLPDYYSPE GMGLIVPKTK  600
DGRVVFMLPW LGRTIAGTTD SNTPITMLPE PHEDEIQFIL DAICDYLNVQ VRRGDVLSAW  660
SGIRPLAIDP SAKNTESISR DHVVCEDYPG LVTITGGKWT TYRSMAEDAV NAAVRSGKLK  720
PANGCVTNNL HIVGGNGWDP ASFTVLAQQY VRMKKSYGGK IIPGVMDSYI SKHLSHAYGT  780
MAERVATIAQ NENLGKRLAH GYPFLEAEVA YCARNEYCES AVDFVARRCR LAFLDTDAAG  840
RALPRIIEIL ASEHKWDKAR KKLEFQKAKQ FLETFKSSKN AQFHDGKHTG S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-125	E2F/DP family protein