PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1260
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family SRS
Protein Properties Length: 348aa    MW: 38577 Da    PI: 9.3061
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1260genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70222.53.1e-076196439
                         DUF702  4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39
                                   ++ +C  CGn a+  C ++ C+ CC      C+ h 
  evm.model.AsparagusV1_04.1260 61 NKPRCIKCGNVARSRCPFQSCKNCCAKAQNPCHIHF 96
                                   5678****************************9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MFGHRSGLVD IVMAASSPVL TSNNNKVGEA IITSTAINGS TTPQRLVAMD TPPKTNQRGH  60
NKPRCIKCGN VARSRCPFQS CKNCCAKAQN PCHIHFLKQS SILPAQPPTT TPLPEQPSTD  120
GPSTGASWRL SSLRKLSATF ASTMRVKKPL TRKDAVNINK WRFSKLKEHV EGNVEAENEA  180
FDRYTWNVRL LEETFSTEGI ISDGQSTLEP TSSDKFQKLV ASLKVKLMER PYELDAGKEH  240
KRRKKEGEWR AERTAAFSDL IDKLSKARSE DDLKPCLEMK VQLLNRSESK IDQEDPEKSL  300
LPKQEPDTIM DSSVYSAPKI CTAVHMNQVA LSNINAKLSS LVELAEL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.18e-61SRS family protein