PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | Trihelix | ||||||||
Protein Properties | Length: 214aa MW: 25752.7 Da PI: 7.2579 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.3 | 1.3e-15 | 1 | 48 | 38 | 86 |
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 mrerg++rsp qCk+kw+nl +ryk +++e + +++ ++cp+fd+l+ evm.model.AsparagusV1_04.1061 1 MRERGYQRSPDQCKCKWKNLVNRYKGKETSETSD-PDNGKHCPFFDELH 48 89******************************96.89999*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MRERGYQRSP DQCKCKWKNL VNRYKGKETS ETSDPDNGKH CPFFDELHAV FTERARNMQH 60 LLESETSTLN HPQKKLKRSS GVRFSDEISD ADDDNEESDD EQHLTKNRKK KTDKIHKPKA 120 ANNNVHELLQ DFLQQQQRAE AQWRDLMERM GQERRMFEKE WQQSMEKLER ERFMLERAWQ 180 EKEEQRRITE ENRALKRDAL LNTLLHKLIQ EDL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 74 | 114 | KKLKRSSGVRFSDEISDADDDNEESDDEQHLTKNRKKKTDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 7e-26 | Trihelix family protein |