PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.100
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 264aa    MW: 29861.3 Da    PI: 6.0981
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.100genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.85.2e-50221511129
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrF P+deelv++yL++kv++++  +e ++ evd+++++Pw+Lp  ++ + +ewyfFs rd+kyatg+r+nra ksg
  evm.model.AsparagusV1_04.100  22 LPPGFRFYPNDEELVCHYLCRKVRSTEGAVEGTMVEVDLHTHDPWELPDVARLNANEWYFFSFRDRKYATGSRSNRASKSG 102
                                   79*************************999899***************77777899************************* PP

                           NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                                   yWkatgkd+ v++  ++ +vgl+ktLvfy+grap+g k++Wvmhe+rle
  evm.model.AsparagusV1_04.100 103 YWKATGKDRMVCDPsTRGVVGLRKTLVFYRGRAPNGIKSSWVMHEFRLE 151
                                   ************9867778***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MISLLHTQTA GSMGLRDIES SLPPGFRFYP NDEELVCHYL CRKVRSTEGA VEGTMVEVDL  60
HTHDPWELPD VARLNANEWY FFSFRDRKYA TGSRSNRASK SGYWKATGKD RMVCDPSTRG  120
VVGLRKTLVF YRGRAPNGIK SSWVMHEFRL ENPHSPPKED WVLCRVMHRR KGEEQETKIG  180
SSPPLIGDQP LSLQSYREIS SSPCNAPNQE NNNNNSNSSR FIDDDESNLP QCSFHDFTPQ  240
LEIESCGGDE LGLFLDVGPS WQT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-83NAC family protein