PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.434 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | FAR1 | ||||||||
Protein Properties | Length: 163aa MW: 18581.1 Da PI: 5.4511 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 56.9 | 7e-18 | 86 | 152 | 2 | 67 |
FAR1 2 fYneYAkevGFsvrkskskksk.rngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 fYn+YA+++GF r+ +s++sk ++ ++++fvCskeg +++ +++++++r+r + r gCka+++ evm.model.AsparagusV1_03.434 86 FYNDYARRLGFPFRVGRSRRSKgVDEVLIMKRFVCSKEGVYRKKPSEETSRKRERLSMREGCKAMME 152 *********************62567789************99999999*****************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MEASRSEGDD LIVDYVECLM SLPTNARSVE NENSVLQVSV PPEEPSRIPI GIPTQPKDLV 60 QITTEDSKLE PFLGMEFESD EAAKTFYNDY ARRLGFPFRV GRSRRSKGVD EVLIMKRFVC 120 SKEGVYRKKP SEETSRKRER LSMREGCKAM MESWLPSSER LH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 1e-18 | FAR1 family protein |